Stella humosa: STHU_47420
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Entry
STHU_47420 CDS
T06078
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shum
Stella humosa
Pathway
shum03030
DNA replication
shum03410
Base excision repair
shum03420
Nucleotide excision repair
shum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STHU_47420
03410 Base excision repair
STHU_47420
03420 Nucleotide excision repair
STHU_47420
03440 Homologous recombination
STHU_47420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shum03032
]
STHU_47420
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_47420
Enzymes [BR:
shum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STHU_47420
DNA replication proteins [BR:
shum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
STHU_47420
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
STHU_47420
NER (nucleotide excision repair)
GGR (global genome repair) factors
STHU_47420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Beta-prop_NOL10_N
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BBK34108
LinkDB
All DBs
Position
5009630..5012479
Genome browser
AA seq
949 aa
AA seq
DB search
MTELVTTIIETAAIEPGATPPLPMRHLYLVDGSGFIFRAFHALPPLTRADGTPVGAVLGF
SNMLLKLLGETDADAVAVIFDASRYSFRNAIYDAYKAQRPDAPPELIPQFPLVREATEAF
NLPGIESDGYEADDIIATYARAAQRRGIEVTIVSSDKDLMQLVDDGIRMLDPIKNKAIGP
DEVREKFGVAPDRVVDVQALAGDSVDNVPGVPGIGVKTAAELINTYGDLDQLLARAGEIK
QPKRRESLIQHADLARVSRELVRLKDDVPDLPPLEALAVRPADPNRLVEFLRTQNFRTLL
SRVESRNANRAAATAALAPVAAADAQATSAEGGAAAPMPAATAANYVLIQDLDVLDAWIA
RATAAGAFAVDTETTSLDAVTCELVGVSLSIEPGEGAYLPLAHKVEGLDLTGGAPRQIDR
DTALARLKPLLEDPAVLKIGHNLKYDAVVLGRHGIQVAPADDTMLLSYVLDGHLHGHGMD
ELALLHLAHKTIAFADVCGTGKNQITFDLVPLDRARDYAAEDAEVTLRLHRLLRPRLLKE
RQVALYETTERPLAPVIAAMERAGIKVDPVELKRLSRDFGERLAVLETEIHRLAGRPFNV
GSPKQLGEVLFDEMSLAGGKKGKTGAYATGAEVLEVLAAQGHALPARVLDWRQLAKLKST
YADALVEQINPATGRVHTSYALASTSTGRLSSTDPNLQNIPVRTEEGRKIRRAFIAEDGH
VLMSADYSQIELRLAAHVADIPSLKDAFRQGIDIHALTASQVFGVPVEGMDPQVRRRAKA
INFGIIYGISGFGLAQQLGIPQGEAQAYIAAYFERYPGIRAYMDRTKQLAREQGYVTTIF
GRRCWVPGIKDSNPARRAFAERQAINAPLQGSAADIIKRAMARIPAALTEAGLSATMLLQ
VHDELIFEVREAEVEATAALVRRVMEGAAHISVPLVVDTGVGRDWETAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgagcttgtcaccaccatcatcgagaccgctgcgatcgaaccgggagcgacaccg
ccgctgccgatgcgccatctctatctggtcgacggctcgggcttcatcttccgcgccttc
catgccctgccgccgctgacgcgggccgacggcacgcccgtcggcgccgtgctgggattc
agcaacatgctgctgaagctcctgggcgagacggatgccgacgccgtcgccgtcatcttc
gacgcctcgcgctatagcttccgcaacgccatctacgacgcctacaaggcgcagcgcccc
gacgccccgcccgagctgatcccgcaattcccgctggtgcgcgaggcgaccgaggccttc
aacctgcccgggatcgagagcgacggctacgaggccgacgacatcatcgccacctatgcc
cgggcggcccagcgccgcggcatcgaggtgaccatcgtctcgtccgacaaggacctgatg
cagctggtggatgatggcatccgcatgctggacccgatcaagaacaaggcgatcgggccg
gacgaggtacgcgaaaaattcggcgtggcgcccgatcgggtggtcgacgtgcaggcgctg
gccggcgattccgtcgacaacgtgccgggcgtgcccggcatcggcgtgaagaccgcggcc
gagctgatcaacacctatggcgacctcgaccagctgctcgcccgcgcgggcgagatcaag
cagcccaagcgccgcgaatccctgatccagcatgccgacctggcccgcgtctcgcgcgaa
ctggtgcgcctgaaggacgacgtgccagacctgccgccgctggaggcgctggccgtgcgc
ccggccgacccgaaccggctggtggagttcctgcgcacgcagaacttccgcaccctgctg
agccgggtggaaagccgcaacgccaatcgggccgccgccacggccgcgctggcgcccgtg
gccgccgccgacgcccaggcgacatcggccgagggcggcgcggccgcgccgatgccggcc
gcaaccgcggcgaactatgtcctgatccaggacctggatgtgctcgacgcctggatcgcc
cgggcgacggcggccggcgcgttcgcggtcgataccgagacgacctcgcttgacgccgtc
acctgcgagctggtcggcgtgtccttgtcgatcgaaccgggcgaaggcgcctacctgccg
ctcgcccacaaggtggaggggctggatctgaccggcggggcaccccgccagatcgaccgg
gacacggcgctggcccggttgaagccgctgctggaagacccggccgtgctgaagatcggc
cacaacctgaaatacgacgccgtcgtgctgggccggcacggcatccaggtggcgccagcc
gacgacaccatgctgctgtcctatgtgctggacgggcacctgcacgggcatgggatggac
gagctggcgctgctccaccttgctcacaagaccatcgccttcgccgatgtctgcggcacc
ggcaagaaccagatcaccttcgacctggtgccgctggatcgcgcgcgcgactatgccgcc
gaggatgccgaggtgacgctgcggctgcaccggctgctgcgcccgcgcctgctgaaggaa
cgccaggtcgccctctacgagacgaccgagcgaccgctggcgccggtgatcgcggccatg
gagcgggccggcatcaaggtcgacccggtcgagctgaagcgcctcagccgcgacttcggc
gagcggctggcggtgctggagaccgagatccaccggctggccggccgcccgttcaacgtc
ggctcgcccaagcagctgggagaggtgctattcgacgagatgagcctggccggcggcaag
aagggcaagaccggcgcctatgccaccggcgccgaggtgctggaagtcctggccgcgcaa
ggccacgccctgcccgcccgcgtgctcgactggcgccagctcgccaagctgaagtcgacc
tatgccgacgcgctggtggagcagatcaacccggccacgggccgcgtccacacctcctac
gcgctggcctcgacctcgaccgggcggctgtcctcgaccgatcccaacctgcagaacatc
cccgtccgcaccgaggaaggccgcaagatccgccgcgccttcatcgccgaggacgggcat
gtgctgatgtcggccgactattcgcagatcgagctgcgcctggccgcccacgtcgccgac
atcccctcgctgaaggacgccttccgccagggcatcgacatccacgcgctgaccgccagc
caggtcttcggcgtgccggtggagggcatggacccacaggtccgccgccgcgccaaggcg
atcaacttcggcatcatctacggcatcagcggcttcggcctggcccagcagctaggcatc
ccccagggcgaggcgcaggcctatatcgcggcatatttcgagcgctatcccggcatccgc
gcctacatggaccgcaccaagcagttggcgcgcgagcagggctatgtcacgacgatcttc
ggccggcgctgctgggtgcccggcatcaaggacagcaaccccgcgcggcgcgccttcgcc
gagcgccaggcgatcaacgcccccctccagggctcggccgccgacatcatcaagcgcgcc
atggcccgcattccggccgccctgacggaagccggcctgtcggccaccatgctgctgcag
gtgcacgacgaactgatcttcgaggtgcgggaggccgaggtcgaggcgaccgccgcgctc
gtgcgccgggtgatggagggggcggcccatatctcggtgccgctggtggtggataccggc
gtcgggcgggattgggagacggcgcactga
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