Stella humosa: STHU_52010
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Entry
STHU_52010 CDS
T06078
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
shum
Stella humosa
Pathway
shum03030
DNA replication
shum03430
Mismatch repair
shum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STHU_52010 (dnaX)
03430 Mismatch repair
STHU_52010 (dnaX)
03440 Homologous recombination
STHU_52010 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shum03032
]
STHU_52010 (dnaX)
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_52010 (dnaX)
Enzymes [BR:
shum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STHU_52010 (dnaX)
DNA replication proteins [BR:
shum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STHU_52010 (dnaX)
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STHU_52010 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_30
AAA_14
AAA_19
AAA_18
AAA_16
AAA_2
AAA_assoc_2
TsaE
SRP54
nSTAND3
DUF815
AAA_24
NTPase_1
Adeno_E1B_55K_N
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BBK34567
LinkDB
All DBs
Position
complement(5467300..5469120)
Genome browser
AA seq
606 aa
AA seq
DB search
MTDPTAPLQPYRVLARKYRPARFADLIGQEALVRTLGNALRTGRIAHAYMLTGVRGVGKT
TTARIIARALNCIGVDGKGGPTIDPCGVCANCTAIAEDRHVDVLEMDAASRTGVGDMREL
IDGVRYLPVQARYKIYIIDEVHMLSGAAFNALLKTLEEPPSHVKFVFATTEIRKVPITIL
SRCQRFDLRRIEADRLFEHFRRIAGEEGVAAEDEALRLISRAADGSVRDGLSLLDQAIAL
GDGPVEAARVRDMLGLADRGQIFALFAAVMKGAVADALDRFDAAYRSGADPVAVLQDLLG
VVHMVTRLKTAPESVEAASLPEIERVEGGALAEALSVPVLTRAWQILLKGLGETQTAPVP
RQAAEMVLIRLAHVANLPDPAQLVRLLEEQRNGAAPPAPAPAGPGANGGMRAEAGGRPRP
LPTMAPSPVPVVAAQAAELPQPASFAAAVALFTERREAILHSQILQDVHLVRFDVGRIEV
RLRPQAQRDIPNRMGSLLTEWTGRRWVISVSDQPGEATLREQAAEAESALRDQLSQHPLV
RAVLDAFPGAEIERIRQPEGSTPAPPAAIMERPVGGRGGEPPPEPDFVPEDYPDDDVDPY
DGEDFP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgaccgcccccctccagccctatcgcgtcctcgcccggaagtatcgcccc
gcccgctttgccgacctgatcggccaggaggcgctggtgcgtacgctgggcaatgcgctg
cgcaccggccgcatcgcccatgcctacatgctgaccggcgtccgtggggtgggcaagacg
accaccgcccgcatcatcgcgcgcgcgctcaattgcatcggcgtggacggcaagggcggg
ccgaccatcgacccctgcggcgtctgcgccaactgcacggcgatcgccgaggaccggcat
gtcgacgtgctggagatggacgccgcgtcccgcaccggcgtcggcgacatgcgcgagctg
atcgacggcgtgcgctacctgccggtccaggcacgctacaagatctacatcatcgacgag
gtccacatgctgtcgggggcggcgttcaatgcgctgctgaagacgctggaggagccgccg
tcgcacgtgaagttcgtcttcgccacgaccgagatccgcaaggtcccgatcaccatcctg
tcgcgctgccagcgcttcgacctgcggcggatcgaggccgaccgcctgttcgagcatttc
cgccgcatcgccggcgaggaaggcgtggcggccgaggacgaggcgttgcgcctgatctcg
cgcgcggccgacggctcggtgcgcgacggcctgtcgctcctcgaccaggcgatcgcgctg
ggcgacgggccggtcgaggccgcccgcgtgcgcgacatgctgggcctggccgatcgcggc
cagatcttcgcgctcttcgccgcagtgatgaagggggcggtggccgacgcgctcgaccgc
ttcgatgccgcctaccggtcgggcgccgacccggtggccgtgctgcaggacttgctgggc
gtggtccacatggtgacgcgcctgaagaccgcgcccgaatcggtggaggccgccagcctg
cccgagatcgagcgcgtggaaggcggcgcgctggccgaggcgctgtcggtgccggtgctg
acccgcgcctggcagatcctgctgaagggcctgggcgagacgcagaccgccccggtgccg
cgccaggcggccgagatggtgctgatccgcctggcccatgtcgctaacctgcccgacccg
gcccagctcgtccgcctgctggaagagcagcgcaatggtgccgccccgccggcgccggcc
cccgccggcccgggggccaatggcgggatgcgggcggaggcgggtggtcggccgcggccc
ttgccgacgatggcgcccagccccgtgcctgtcgtcgcggcccaggccgccgagctgccg
cagccggccagctttgctgccgccgtagcgcttttcaccgagcggcgggaagcgatcctc
cattcgcagatcctgcaggacgtccacctcgtgcgcttcgatgtggggcgcatcgaggtg
cgcctgcgcccgcaggcgcagcgcgacattcccaaccgcatgggctcgctgctgacggaa
tggaccggccggcgctgggtcatcagcgtgtccgaccagccgggcgaggccaccctgcgc
gagcaggcagccgaggccgaatcggccctgcgtgatcaactgtcccaacacccgctggtg
cgggcggtgctggacgcttttccgggcgccgagatcgagcgcatccgccagccggaggga
tcgaccccggcgccacccgccgcgatcatggaacggccggtcggtggtcgcggcggcgaa
cctcccccggaacccgatttcgtgcccgaggattatcccgacgacgacgtcgacccctac
gacggagaggactttccatga
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