Stella humosa: STHU_52040
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Entry
STHU_52040 CDS
T06078
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shum
Stella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_52040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_52040
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
STHU_52040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BBK34570
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All DBs
Position
5470490..5472130
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AA seq
546 aa
AA seq
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MMPKASASGGRPRLARTLTAAAGLIAGAAAMATIGLSSPAVAQGKTLRWAHSNDATTMDP
YGAYIPVNASLLNNIYEPLVRYDRQYRFEPSLATEWTMLAPDRWRFVLRRGVKFHDGNPF
TAEDVVASLQRASDPNSPYRPATQMIKEVVAIDDHTVEIVLQGPYPIILNDLAGVYIMDR
QWLEKNDTLRAVNPAKGEESFATRNTNGTGPFRLVSRRPDVETVMEANPDWWDKPEHNIE
KIVYRPLGADATRVAALLSGEVDLVTPIAVQDVDRIRRSQDLKVIEIPDLKVALFGLNIG
AAELNDSDVKGRNPLGDVRVRQALYQAVDRDAITRRLLRGLTVPTHALVASEIQGYAPEI
AAEPAPFDPDAAKRLLAEAGYPDGFRVGFDCPTERFVNGEQVCQAVVGMWARIGVKAAFQ
THPYAPYLKKVLNGQADIYILGWANTPQLDAFSILNNVFHTKAPRSGTWNPGKYGNPKVD
ALIDQIGVEVDPAKRQGLMKDAFLAIKADYAALPLYREPLVLGARRNVEMWAAPDAKVRV
WLTRMN
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaaggcaagcgcatcgggaggccggccacggctcgcccgcaccctcaccgcc
gccgccggcctcatcgcgggcgcggccgccatggccacaatcgggctgtcgtcaccggcg
gtcgcccaaggcaagacgctgcgctgggcgcacagcaacgacgccacgaccatggacccc
tacggggcctatatcccggtcaacgcgtccctcctcaacaacatctatgagccactggtc
cgctacgaccgccagtaccgattcgagccgtcgctggcgaccgaatggaccatgctggcg
cccgaccgctggcgcttcgtgctccgccgcggcgtcaagttccatgacggcaaccccttc
acagccgaggacgtggtcgcctcgctgcagcgcgccagcgacccgaactccccctatcgg
ccggcgacgcagatgatcaaggaggtggtcgcaatcgacgaccacacggtcgagatcgtc
ttgcagggcccttatccgatcatcctgaacgacctggccggcgtctacatcatggaccgg
cagtggctggagaagaacgacaccctgcgggcggtgaacccggccaagggcgaggaatcc
ttcgccacccgcaacaccaacggcaccgggccgttccgcctcgtctcgcgtcgccccgac
gtcgagacggtgatggaggccaatcccgactggtgggacaagcccgagcacaatatcgag
aagatcgtctaccggccgctcggcgccgacgccacccgggtggcggccttgctgtcgggc
gaggtcgacctggtgacgccgatcgccgtgcaggacgtcgaccgcatccgccgcagccag
gacctgaaggtcatcgagatccccgacctgaaagtggcgctgttcggcctcaacatcggc
gcggccgagctgaacgacagcgacgtgaagggccgcaacccgctgggcgacgtccgcgtc
cgccaggcgctctaccaggcggtcgatcgggacgcgatcaccaggcgcttgctgcgcggc
ctgaccgtgccgacccacgccctcgtcgcctcggaaatccagggctacgcgcccgagatc
gcggccgagccggcccccttcgaccccgacgccgccaagcgcctgctggccgaggccggc
tatcccgacggcttccgcgtcggcttcgactgcccgaccgagcgcttcgtgaatggcgag
caggtctgccaggccgtcgtcggcatgtgggcgcgcatcggcgtgaaggccgcgttccag
acccatccctatgcgccctacctgaagaaggtgctgaacgggcaggccgacatctacatc
ctgggctgggcgaataccccgcagctcgacgccttctcgatcctcaacaacgtcttccac
accaaggcgccgcgcagcggcacctggaaccccggcaagtacggcaaccccaaggtcgat
gcgctgatcgaccagatcggcgtcgaggtcgacccggccaagcgccagggcctgatgaag
gatgcgttcctggcgatcaaggccgactatgccgccctgccgctctaccgcgagccgctg
gtcctgggcgcgcggcgcaacgtcgagatgtgggcggcacccgacgccaaggtccgcgtc
tggctcacgcggatgaactga
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