Stella humosa: STHU_52640
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Entry
STHU_52640 CDS
T06078
Name
(GenBank) transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shum03000
]
STHU_52640
Transcription factors [BR:
shum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STHU_52640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BBK34630
LinkDB
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Position
5531376..5532311
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AA seq
311 aa
AA seq
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MGMSRRLPSLNGIKAFEAAARTGGFAAAAAELNVSPAAISRMVQLLEARLGVALFERRAN
RLVPTAAGRSYHAGLTPLLDALAALTDQVTAASASRVLTIGAGPTFASRWLIPRLADFRR
QAPDIAVRFTTGGGGVPFSDDWTCGITLGLGRWPGLVAERLFAADLLPVTAPALAARLGH
PADIDPAAMIRVAHAPEDWPLWLAAAGLPRTTARGPEFQYYGQALQAAGDGVGVAMGIRP
YIDDDLAAGRLVSPFQLTVPKGQQWYLLYRGAVRDDPGFTAFRRWLIAAATGPAGTEADM
AAACRPAMPLL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtcgcgccgcctgccctcgctgaacggcatcaaggccttcgaggccgccgcg
cgcaccggcggcttcgccgcggcggcagcagagctcaacgtgtcgccggccgcgatcagc
cgcatggtgcaattgctggaggcgcgcctgggcgtggccttgttcgagcgccgggccaat
cgcctggtgccgaccgcggcggggcgcagctatcatgccggcctgaccccgctgctggat
gcgctggcggccctgacggaccaggtgaccgccgcctcggccagccgggtgctcaccatc
ggcgccgggccgaccttcgccagccgctggctgatcccgcggctggccgatttccgccgg
caggcgcccgacatcgcggtgcgcttcaccaccggcggcggcggcgtgcccttctcggac
gactggacctgcggcatcacactcggcctggggcgctggcccggcctggtggccgagcgc
ctgttcgcagccgacctgctgccggtcaccgcgcctgcgctggccgcccgcctgggacat
ccggccgacatcgaccctgccgccatgatccgggtcgcgcacgcacccgaggactggccg
ctgtggttggccgcggcgggcctgcccaggacgaccgcacgcgggccggagttccagtat
tacggccaagcgctccaggccgcgggcgacggggtgggggtcgccatgggtattcgcccc
tatatcgacgacgatctggctgccggccgactggtctcccccttccagctaacggtgccg
aaggggcagcaatggtacctgctctatcgcggggcggtgcgcgacgacccgggcttcaca
gccttccggcgctggctgatcgccgcggcaaccgggccggccggcaccgaggcggacatg
gctgcggcttgccgtcccgccatgccgcttctataa
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