Allostella humosa: STHU_52930
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Entry
STHU_52930 CDS
T06078
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
shum
Allostella humosa
Pathway
shum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STHU_52930 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shum01007
]
STHU_52930 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shum03016
]
STHU_52930 (trpS)
Enzymes [BR:
shum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
STHU_52930 (trpS)
Amino acid related enzymes [BR:
shum01007
]
Aminoacyl-tRNA synthetase
Class I (G)
STHU_52930 (trpS)
Transfer RNA biogenesis [BR:
shum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
STHU_52930 (trpS)
Prokaryotic type
STHU_52930 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BBK34659
LinkDB
All DBs
Position
complement(5559666..5560673)
Genome browser
AA seq
335 aa
AA seq
DB search
MNRIFSGIQPTGNLHLGNYLGAIRNWVGLQHDYDCIFCIVDLHAITLPQDPAGLRASTRE
VAAAYIAAGVDPDHCTIFNQSTVAGHSQLAWVLGCLTPLGWLNRMTQFKEKAGKQKDMAG
LGLYSYPVLMAADILLYKATHVPVGEDQKQHLELARDIAGAFNRAYGVEYFPLPEPQILG
TATRVMSLRDGTKKMSKSDPSDYSRINMTDDAETVALKIRRAKTDPLPLPDSVEGLADRP
EAENLLDIYAALASIDRDAAIAEFAGAQFSGFKEKLADLAVSVLGPIGAEMKRLVAAPDH
VDAILARGAERANAVAAPHLAEIYEMVGMLRPQHG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaatcttctccggcatccagccgaccggcaatctgcacctcggcaactatctg
ggcgcgatccgcaactgggtgggcctgcagcacgactacgactgcatcttctgcatcgtc
gacctgcacgcgatcaccctgccgcaggacccggccggcctgcgcgccagcacgcgcgag
gtggccgccgcctacatcgcggccggcgtcgacccggaccactgcacgatcttcaaccag
agcacggtggccggccattcgcagctggcctgggtgctcggctgcctgacgccgctcggc
tggctcaaccgcatgacccagttcaaggagaaggccggcaagcagaaggacatggcgggc
cttggcctctattcctatccggtgctgatggccgccgacatcctgctctacaaggccacc
cacgtgccggtcggcgaggaccagaagcagcatctggagctggcgcgcgacatcgccggc
gccttcaaccgcgcctacggggtggaatacttccccctgccggaaccccagattctcggc
accgcgacccgggtgatgagcctgcgcgacggcaccaagaagatgagcaagtccgacccg
tcggactattcgcgcatcaacatgaccgacgatgccgagacggtcgcgctcaagatccgg
cgcgccaagaccgacccgttgccgctgcccgacagcgtggaggggctggccgaccggcca
gaggccgagaacctgctcgacatctatgccgcattggccagcatcgatcgggatgcggcg
atcgcggagttcgccggtgcccagttctcgggcttcaaggaaaagctggcggacctcgcc
gtgtcggtcctgggaccgatcggggcggagatgaagcgcctggtggcggcgcccgaccat
gtcgatgccatcctcgcgcgtggggcggagcgtgccaacgcggtcgccgccccgcacttg
gcggagatctacgagatggtcggcatgttgcgtccgcaacacggctag
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