Allostella humosa: STHU_53200
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Entry
STHU_53200 CDS
T06078
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shum
Allostella humosa
Pathway
shum03030
DNA replication
shum03430
Mismatch repair
shum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STHU_53200
03430 Mismatch repair
STHU_53200
03440 Homologous recombination
STHU_53200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shum03032
]
STHU_53200
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_53200
Enzymes [BR:
shum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STHU_53200
DNA replication proteins [BR:
shum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STHU_53200
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STHU_53200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBK34686
LinkDB
All DBs
Position
complement(5580152..5580826)
Genome browser
AA seq
224 aa
AA seq
DB search
MREIVVDTETTGLDPRDGHRLIEVACLELQNGVRSGVEYVSRINPERLVDPEAYAVHGIS
DADLVGAPVFAEMVADFLAFIGDDPLVIHNAEFDLRFINSELARTGHAAIPSTRAVDTLT
MARRRFPGSPASLDALCRRFGIDTSARVKHGARLDAELLADVYLELTGGRQKGLSLTAET
AVVVERRTAVVRVPRAPRPHAPTPAEAAAHAALVARIKGAIWLR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtcgtcgacaccgagacgaccggcctcgacccgcgcgatggccaccgc
ctgatcgaggtggcgtgcctcgagctgcagaacggcgtgcgctccggcgtggagtatgtc
agccgcatcaaccccgagcggctggtcgatcccgaagcctatgccgtgcacggcatctcc
gacgccgatctggtcggggcgccggtcttcgccgagatggtggccgatttcctcgccttc
atcggcgacgatccgctggtcatccacaacgcggaattcgacctgcgcttcatcaattcg
gaactggcccgcaccggccacgcggccatcccgtcgacccgtgccgtcgacacgctgacc
atggcgcgccggcgctttcccgggtccccggccagcctggacgcgctctgccgccgcttc
ggcatcgacaccagtgcccgcgtcaagcatggcgcgcgcctggacgccgagctgctggcc
gacgtctatctcgaactgaccggcggccggcagaagggtctcagcctgaccgccgagacg
gcggtcgtggtggaacgccggacagccgtggtgcgggtgccgcgtgcgcccaggccccac
gcgccgacgccggcggaggccgccgcgcacgccgcgctggttgcgcggatcaagggcgcc
atctggctccgttga
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