Stella humosa: STHU_53410
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Entry
STHU_53410 CDS
T06078
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
shum
Stella humosa
Pathway
shum03030
DNA replication
shum03430
Mismatch repair
shum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STHU_53410 (holA)
03430 Mismatch repair
STHU_53410 (holA)
03440 Homologous recombination
STHU_53410 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shum03032
]
STHU_53410 (holA)
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_53410 (holA)
Enzymes [BR:
shum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STHU_53410 (holA)
DNA replication proteins [BR:
shum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STHU_53410 (holA)
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STHU_53410 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
BBK34707
LinkDB
All DBs
Position
complement(5599949..5600974)
Genome browser
AA seq
341 aa
AA seq
DB search
MKVPNARLDAFCKKPDAGIRAVLVYGPDAGLVRERADQLGRSVLSELDDPFRVSVLTGAA
IVADPPRLAEETAAQSLVGGRRLVRVRETSDASAPAFDRVLRDGASGDTLIVAEAGELRA
TSPLRKLFEAAAAAAAVPCYVDEGAALERVLRETLGRHNVSLDSEAGRWLAAHLGGDRGV
LRGEADKLALYVGDGGRITVEDCIAVVGDSIEIAMDAVVTATAGGDRARLERLLDRVFAE
GEQPVRVLRALQRHYLRLFTLAAAVEAGASAQSAVESLRPRPHFKEAPHLTQQVQRWSRR
RLTYALSRLADAEADCKRSVFPAELVCRRALDDLSRVAQRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccgaatgcccggctcgacgccttctgcaagaagccggacgccggcatccgc
gccgtcctcgtttatggcccggacgccggcctcgtacgcgagcgcgccgaccagctcgga
cgcagcgtcctgtccgagctggacgacccgttccgcgtgtcggtgctgactggcgctgcc
atcgtcgccgacccgccgcgcctggccgaggagaccgcggcccagtcgctggtcggcggc
cgtcgcctcgtgcgcgtgcgcgagacgagcgacgcctcggcgccggccttcgaccgcgtc
ctgcgcgatggcgcatccggcgataccctgatcgtggccgaagccggcgaactgcgggcg
accagccccctgcgcaagctgttcgaggcggcggcggcggcagcagccgtcccctgctat
gtcgatgaaggtgccgcgctcgagcgcgtcctgcgcgagacccttgggcgccacaatgtc
agcctggacagcgaggccgggcgctggctggcggcccatctgggcggcgatcgcggcgtg
ctgcgcggcgaggccgacaagctggccctctatgtcggcgacggcggccggatcaccgtc
gaggattgcatcgccgtggtcggcgacagcatcgagatcgccatggatgccgtggtgacg
gcgacggccggcggcgaccgcgcgcggctggaacggttgctcgaccgcgtcttcgccgag
ggcgagcagcccgttcgcgtcctgcgcgcgttgcagcgccactatctgcgcctgttcacc
ctggcggccgcggtcgaggccggggccagtgcccagtccgccgtcgaatccctgcggccc
cgaccgcatttcaaggaagccccgcacctgacccagcaggtccagcgctggtcgcggcgg
cggctcacctatgcgctgtcgcgcctggcggacgcggaggccgactgcaagcggtctgtc
ttcccggccgagctggtgtgccgccgggcgctcgacgacctctcaagggtcgcccagcgc
cgttga
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