Stella humosa: STHU_54350
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Entry
STHU_54350 CDS
T06078
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shum03000
]
STHU_54350
Transcription factors [BR:
shum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STHU_54350
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
HTH_24
HTH_AsnC-type
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BBK34801
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Position
5697820..5698761
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AA seq
313 aa
AA seq
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MINYTLAQVMTFLAVAETKSFRLAAERLRVSPPAVSQRIRELEDRLGVRLFHRTTRSVVP
TAEGERLGAAALQALDQLHDVALALRDEAALRHGRFVVATLPSMAATILPLAMADFRAGH
PGVSIGMIDAHEGRALDAVAHGEAAFGLLARAPPAHQDLLFTPLFRDDSVAVMAVGHPLA
GRRKLDLRELVDQALLVPAVGTSVRAMVDGAFARCGLSFVPAYEAMNLTTLLALAETGFG
VTFVPRIFAIRLDLSRLKMVPLVGRPMHRDIGIVTPRGRSLSPSAAAFRDFLGRRFARPG
RHRAPVPADIQAM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattacaccctggcccaggtcatgaccttcctggcggtggccgaaaccaagagc
ttccgcctggcggccgagcgcctgcgggtgtcgccgcccgccgtcagccagcgcatccgc
gagctggaggaccggctgggcgtgcgcctcttccaccgcaccacccgctccgtcgtgccg
acggccgagggcgagcggctgggggcggccgccctccaggcgctggaccagctccacgac
gtggcgctggccttgcgcgacgaggcggcactgcgccacggccggttcgtggtggcgacc
ctgccgtcgatggccgcgaccatcctgccgctcgccatggcggatttccgggctggccac
cccggcgtctccatcggcatgatcgacgcgcatgagggccgggccctggatgcggtcgcc
catggcgaggcggccttcggcctgctcgcgcgcgcgccgccggcccaccaggacctgctg
ttcacgccgcttttccgcgacgattcggtggcggtcatggcggtcggccatcccctggcg
gggcgccgcaagctcgacctgcgcgaactggtcgaccaggcgctgctggtgccggcggtc
ggcaccagcgtgcgcgccatggtcgacggggccttcgcccgctgcggcctgtcgttcgtg
ccggcctacgaggcgatgaacctgacgaccctgctggccctggccgagaccggcttcggc
gtcaccttcgtgccgcgcatcttcgccatccgcctcgacctgtcgcggctgaagatggtg
ccgctggtgggccggccgatgcatcgcgacatcggcatcgtcacgccgcgtggccggtca
ttgtcgccgtcggcggcggccttccgcgacttcctcggccggcgcttcgcccgccccggc
cgccaccgcgcacccgtcccggcggacattcaggccatgtag
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