Streptomyces hundungensis: DWB77_00344
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Entry
DWB77_00344 CDS
T07388
Symbol
sigF_1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shun
Streptomyces hundungensis
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shun03021
]
DWB77_00344 (sigF_1)
Transcription machinery [BR:
shun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWB77_00344 (sigF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
GerE
KORA
HTH_23
HTH_37
DUF7343
HTH_31
HTH_3
Rio2_N
Motif
Other DBs
NCBI-ProteinID:
AYG78237
UniProt:
A0A387HBU7
LinkDB
All DBs
Position
345672..346670
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AA seq
332 aa
AA seq
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MTAVARPERMSQTTRVNTAARTGISAWAEMPWIEDAGAIAPRDARELSKLFFEGLRKVEE
GSREHQYVRNTLIEMNLTLVRYAANRFRNRGGGDMEDVIQVGTIGLIKSIDRFDLSREIE
FSAFAVPYIVGEIKRFFRDTAWAVHVPRRLQELRVDIARCKEHLAVTLDRDPSVKELAAH
LELSEERVVEALIAANGFTASSLDTPTGPGAAVQASGDKSRALADILGEEDPGMEKVENL
QTLGLLLEELTERERHIVSMRFGLELTQAQIGTELGVSQMQVSRLVSRILAKLRTGMLDD
ACSPAPKGPAPRSTAPARHTAGPGLNTALSRG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggtggcgagacctgagcggatgagccaaacaacgagggtcaacacagcggcg
aggaccggcatttctgcctgggcggagatgccctggatcgaggacgccggggcgatcgcc
ccccgggatgcccgggaactgtccaagttgttcttcgaggggctccggaaggtggaggag
ggctcccgtgaacaccagtacgtccgcaacaccctgatcgagatgaacctgactctcgtc
cgctacgccgcaaaccggttccgtaaccgcggcggcggcgacatggaggatgtgatccag
gtagggacgatcggtctgatcaagtcgatcgaccgcttcgacctgtcacgtgagatcgaa
ttctccgccttcgcggtgccgtacatcgtcggtgagatcaagcggttcttccgcgacacg
gcgtgggccgtgcacgtcccgcgtcggctgcaagaactccgcgtagacatcgccaggtgc
aaggagcacctcgccgtgacacttgaccgcgaccccagcgtcaaggagctcgccgcgcac
ttggagctgagcgaggagagagtggtcgaggcactgatcgccgcaaatggtttcaccgca
agctctctcgacacgcccactggtccgggtgccgcagttcaagcctctggcgacaagagc
cgggcgctggctgacatcctcggcgaagaagacccgggcatggagaaggtcgagaacctt
cagacgctgggtctgctgctggaggagctgactgagcgcgagcgtcacatcgtgagtatg
aggttcgggctggaattgacccaggcgcagatcggcacggaactcggagtctcgcagatg
caggtctcgcgactggtttcgcgcatcctggccaagctccgcacgggcatgctcgacgac
gcctgctcaccggcaccgaaaggccccgcgccgcggtcgactgccccggcccggcacacg
gctggcccaggcctcaacaccgcgttgagccgggggtga
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