Streptomyces hundungensis: DWB77_00480
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Entry
DWB77_00480 CDS
T07388
Symbol
pel_1
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shun
Streptomyces hundungensis
Pathway
shun00040
Pentose and glucuronate interconversions
shun01100
Metabolic pathways
shun02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DWB77_00480 (pel_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DWB77_00480 (pel_1)
Enzymes [BR:
shun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DWB77_00480 (pel_1)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AYG78373
UniProt:
A0A387H890
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All DBs
Position
complement(498930..500297)
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AA seq
455 aa
AA seq
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MSASSHRRSPARKRRVLIGAATASLVAAGLAAVPLTMSAGAAAVDLAHAVLPANDGWASS
GTGTTGGRDADVAHTFTVSTRAELAKALGAGPAGAPRIVQIKGAIDANTDDSGKPLDCAD
YAAGTGYSLNAYLKAYDPATWGRSKLPSGAQESARAAAQARQAARVVLSVPSKTTIVGVP
GTGAAIVGGSLQVSNADNVIIRNLGFSDTRDCFPQWDPTDGSTGNWNSQYDAVSVRRSTH
VWADHNTFGDGPHYDSSNPTYFGREYQVHDGALDITNASDLVTVEYNRFTNHDKTMLIGS
SDKDTKLRVTLHHNVFQGIVQRAPLARVGQIHLYDNYYDTATLNGYAHSYSINSRAHAQV
VAQNNYWALSSNRKASQLLSGDGTGAVAGSGNLVNGTATDLVAAYNAEHSSKKIATTVNW
APKLNAGLEPASGLPAKLAKTAGAGVLNSVGGSTG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcttcatcgcaccgccgctcgcccgcccgtaaacgtcgggttctgatcggcgcc
gccaccgcctccctcgtggccgccggactcgcggccgtaccgttgaccatgagtgcgggt
gccgccgccgtcgacctcgcgcacgcggtactgcccgcgaacgacggctgggcctccagt
ggcaccggcaccacgggcggacgggacgccgacgtggcccacaccttcaccgtctcgacc
cgcgccgagctggccaaggccctcggggccggccctgccggagccccccgaatcgtccag
atcaagggggcgatagacgccaacaccgacgattccggcaagcccctcgactgtgccgac
tacgcggccgggacgggctactcgctgaacgcttacctgaaggcctacgaccctgctacc
tggggacgctccaagctgccgtccggcgcacaggagtcggcgcgtgccgcggcgcaggcg
cggcaggccgcccgcgtggtcctgagcgttccttccaagacgacgatcgtcggcgtgccc
ggaaccggcgcggcgatcgtcgggggcagcctccaggtgagcaacgcggacaacgtcatc
atccgcaacctcggcttcagcgacacccgcgactgcttcccccagtgggatccgaccgac
ggctcgacgggcaactggaactcccagtacgacgcggtctcggtgcgccgctccacacac
gtgtgggccgatcacaacaccttcggcgacggcccgcactacgacagctcgaatcccacc
tacttcggccgcgaataccaggtccacgacggcgccctcgacatcaccaacgcctccgac
ctcgtgaccgtcgagtacaaccgcttcaccaaccacgacaagacgatgctcatcggcagc
agtgacaaggacaccaagctgcgggtgacgctgcatcacaacgtcttccaggggatcgtc
cagcgcgccccgctcgcccgggtcggccagatccacctgtacgacaactactacgacacg
gcgacgctcaacggctacgcccacagctacagcatcaactcccgggcccacgcccaggtt
gtcgcccagaacaactactgggctctttccagcaaccggaaggcctcgcaactgctcagt
ggggacggcaccggcgcggtggcgggcagtggcaacctggtcaatggcaccgcgaccgac
ctcgtcgccgcgtacaacgccgaacactccagcaagaagatcgcgacgaccgtgaactgg
gcaccgaagctgaacgcgggcctggaacccgcgagcggtctgcctgccaagctcgccaag
acggcgggtgcgggcgtgctgaacagcgttggcggcagcaccggttga
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