Streptomyces hundungensis: DWB77_01318
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Entry
DWB77_01318 CDS
T07388
Symbol
fpg2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
shun
Streptomyces hundungensis
Pathway
shun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWB77_01318 (fpg2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shun03400
]
DWB77_01318 (fpg2)
Enzymes [BR:
shun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DWB77_01318 (fpg2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DWB77_01318 (fpg2)
DNA repair and recombination proteins [BR:
shun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DWB77_01318 (fpg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
NFACT_N
Ribosomal_S13
zf-RRN7
Motif
Other DBs
NCBI-ProteinID:
AYG79208
UniProt:
A0A387HER2
LinkDB
All DBs
Position
complement(1461502..1462362)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEALREFLSDHLVGQEIAGAQPVAISVLKTYDPPYTALAGRTVTGVARHGKFLD
LDADGLHLCVHLARAGWLRWHDVLPAAPPKPGKGPLALRVALTGGAGFDLTEAGTRKSLA
AYLVHDPSEVPGIARLGPDPLAPDFGRDAFAALLAGERRQLKGALRDQSLIAGIGNAYSD
EILHAARMSPFKPVAHLTDEETTVLYEAMRTTLAEAVERSHGLAAGRLKAEKKSGLRVHG
RTGQPCPVCGDTVREVSFADSSLQYCATCQTGGKILADRRLSKLIK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcccgaagtcgaggccctgcgggaattcctctccgaccacctggtcggt
caggagatcgcgggcgcccagcccgtcgcgatcagtgtcctgaagacctacgaccccccg
tacaccgccctggccggccgcaccgtcaccggcgtggcgcggcacggcaagttcctcgac
ctcgacgccgacgggcttcacctgtgcgtccacctcgcccgggccggctggctgcgctgg
cacgacgtgctgcccgccgccccgcccaaacccggcaagggcccgctcgcgctgcgggtc
gcgctcaccggcggcgcgggcttcgacctcaccgaggcgggcacccgcaagagcctcgcc
gcctacctcgtccacgacccgtccgaggtccccggcatcgcccggctcggccccgacccg
ctcgcccccgacttcggccgcgacgcgttcgccgcgctgctcgcgggggagcggcgccag
ctcaagggcgcgctgcgcgaccagtccctcatcgcgggcatcgggaacgcgtacagcgac
gaaatcctccacgcggcccggatgtccccgttcaagcccgtcgcccatctcaccgacgag
gagaccaccgtgctgtacgaggcgatgcgcaccaccctcgccgaagccgtcgagcggtcg
cacgggctggcggccggccggctcaaggccgagaagaagagcgggctccgcgtgcacggc
cgcaccgggcagccctgcccggtctgcggcgacaccgtccgcgaggtgtcgttcgccgac
tcctcgctccagtactgcgccacctgccagaccggcggcaagatcctcgccgaccggcgc
ctgtcgaagctgatcaagtag
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