Streptomyces hundungensis: DWB77_02022
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Entry
DWB77_02022 CDS
T07388
Symbol
hrdB
Name
(GenBank) RNA polymerase principal sigma factor HrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
shun
Streptomyces hundungensis
Pathway
shun02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DWB77_02022 (hrdB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shun03021
]
DWB77_02022 (hrdB)
Transcription machinery [BR:
shun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWB77_02022 (hrdB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
AYG79904
UniProt:
A0A387H8X0
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All DBs
Position
complement(2270371..2271924)
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AA seq
517 aa
AA seq
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MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRTRKSVAAKSPAKRTATKTVAAKTTVTTTRTVAASAAPAEDV
DVPADEAEDAPKKAVAKKAAVKKTAAKKTVAKKTAAKKTAAKKGDEDEAAEGEELLEDAA
PGKGDDEEPEGESKGFVLSDEDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEV
ELAKRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYT
GRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVH
MVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDG
DSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDE
IGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcgaggaaaggctgatggacagatcgccggcgacgacgtgcgtcgggcc
ttcgaagccgaccagattccgccgacccagtggaagaatgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggaatcaccgaagcgcacc
cgtaagagcgtcgcagcgaagagcccggcgaagcgcaccgccaccaagacggtcgcggcc
aagacgaccgtgaccaccaccaggaccgtcgccgcctccgcggccccggccgaggacgtg
gacgtgccggccgacgaggccgaggacgcccccaagaaggccgtcgccaagaaggcggcc
gtgaagaagaccgccgccaagaagacggtggccaagaagaccgcggcgaagaagaccgcc
gccaagaagggcgacgaggacgaggccgccgagggcgaggagctcctcgaggacgccgcc
cccggcaagggcgacgacgaggagcccgagggcgagagcaagggcttcgtcctgtccgac
gaggacgaggacgacgcgccggcccagcaggtcgccgtcgccggcgccaccgccgacccg
gtcaaggactacctgaagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtc
gagctcgccaagcgcatcgaggccggcctgttcgccgaggacaagctggcgaacgcggac
aagctggcgccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgcc
aagaaccacctcctggaggccaacctccgtctggtggtctcgctggccaagcgctacacc
ggccgcggcatgctcttcctggacctcatccaggagggcaacctcggtctgatccgcgcg
gtcgagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatc
cgtcaggccatcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcac
atggtcgaggtcatcaacaagctggcgcgcgtccagcgccagatgctccaggacctgggc
cgcgagcccaccccggaggagctggccaaggaactcgacatgacccccgagaaggtcatc
gaggtccagaagtacggccgtgagccgatctcgctgcacacccccctcggtgaggacggc
gacagcgagttcggtgacctcatcgaggactccgaggcggtcgtgccggccgacgcggtc
agcttcacgctcctccaggagcagctgcactcggtgctcgacaccctctccgagcgtgag
gcgggcgtggtctccatgcgcttcggcctcaccgacggccagcccaagaccctggacgag
atcggcaaggtctacggcgtgacccgcgagcggatccgccagatcgagtccaagaccatg
tcgaagctgcgccacccgtcgcgttcgcaggtgctgcgcgactacctcgactaa
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