Streptomyces hundungensis: DWB77_02028
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Entry
DWB77_02028 CDS
T07388
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shun
Streptomyces hundungensis
Pathway
shun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB77_02028 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shun03019
]
DWB77_02028 (recQ_1)
03400 DNA repair and recombination proteins [BR:
shun03400
]
DWB77_02028 (recQ_1)
Enzymes [BR:
shun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWB77_02028 (recQ_1)
Messenger RNA biogenesis [BR:
shun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DWB77_02028 (recQ_1)
DNA repair and recombination proteins [BR:
shun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DWB77_02028 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AYG79910
UniProt:
A0A387HG62
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All DBs
Position
2280412..2282583
Genome browser
AA seq
723 aa
AA seq
DB search
MEHTSNAELRTAADTVLARLVGDATGTARLREDQWRAIEALVADKRRALVVQRTGWGKSA
VYFVATALLRGMGAGPTVIVSPLLALMRNQVEAAARAGISARTINSANPEEWDTIQEEVA
AGSVDVLLVSPERLNNPDFRDNVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
VELPPGVPVLATTATANARVTADVAEQLGTGGGSDALVLRGPLDRESLSLNVLSLPDAAH
RLGWLADHLDELPGSGIIYTLTVAAAEEITTYLRRRGHTVASYTGKTENADRQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVAHLGSPSSPIAYYQQVGRAGRGVAHAEVLLLPGRE
DEAIWKYFASVAFPPEEQVRRTLDVLAHSERPMSLPALEPLVELRRIRLETMLKVLDVDG
AVRRVKGGWTTTGQPWVYDTERYAWVARQRSAEQQAMREYASTTGCRMEFLRRQLDDEQA
APCGRCDNCAGARFTADVSGKALDEARGELTRPGVEVEPRKMWPTGLAAIGIDLKGRIPA
GELAFPGRALGRLSDIGWGNRLRPMLAPGAPDGPVPDDVVQAAVSVLTDWAKGSGGWACG
SPDAPPRPVGVVTVPSRTRPALVASLGARIAEIGRMPLLGSLAYADGPAGERIAQSNSAQ
RVRALHHAFVVPEALASALAEAQGPVLLVDDASDTGWTLAVAARLLRRAGAKGVFPLVLA
VQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacgcggaactgcgcacggcggccgacacggtcctcgcccgcctc
gtcggggacgccaccggcacggcgcggctgcgcgaggaccagtggcgggccatcgaggcg
ctggtcgccgacaagcggcgggcgctcgtcgtgcagcgcacggggtggggcaagtccgcg
gtgtacttcgtggcgaccgccctgctgcgcggcatgggcgcgggccccacggtgatcgtc
tcgccgctgctcgccctgatgcgcaaccaggtcgaggccgcggcccgggcgggcatcagc
gcccggacgatcaactcggccaatcccgaggagtgggacaccatccaggaggaggtcgcg
gcgggctccgtggacgtccttctcgtgtcgccggagcgcctgaacaatccggacttccgg
gacaacgtcctgccgaagctgtcggcggccaccggtctgctcgtggtggacgaggcgcac
tgcatctccgactggggccatgacttccgccccgactaccgccggctgcgcaccatgctg
gtcgaactcccgccgggtgtcccggtgttggcgacgaccgccaccgcgaacgcccgggtg
acggcggacgtggccgagcagctcggcaccggcggcggctcggacgcgctggtgcttcgc
ggccccctggaccgcgagagcctcagtctcaacgtgctgtcgctgccggacgcggcccac
cgcctgggctggctcgccgatcacctcgacgagctgccgggctcggggatcatctacacg
ctgacggtcgccgcggccgaggagatcaccacgtatctgcgccggcgcgggcacaccgtc
gcctcgtacacgggcaagacggagaacgcggaccgccagcaggccgaggacgatctgctg
gccaaccgggtcaaggcgctggtcgccacctcggcgctcggcatgggcttcgacaagccg
gacctcggcttcgtggcccacctgggctcgccctcctccccgatcgcctactaccagcag
gtcggccgtgcgggccgtggcgtggcgcatgcggaggtgctgctccttccgggccgcgag
gacgaggcgatctggaagtacttcgcgtcggtggccttccctccggaggagcaggtccgg
cgcaccctcgacgtgctggcgcacagcgaacggcccatgtcgctgccggccctggagcct
ctggtggagctgcgccgcatccgcctggagacgatgctcaaggtgctggacgtggacggc
gcggtgcgccgggtcaagggcggctggacgaccacgggccagccgtgggtgtacgacacc
gagcggtacgcgtgggtggcccggcagcgttccgccgagcagcaggcgatgcgggagtac
gcctcgacgacggggtgccggatggagttcctgcgccgccagctcgacgacgagcaggca
gcgccgtgcgggcgctgcgacaactgcgcgggcgcccgtttcaccgccgatgtgtccggc
aaggcgctggacgaggcgcgcggcgagctcacccggcccggtgtggaggtggagccccgc
aagatgtggcccaccgggctcgccgcgatcggcatcgacctgaagggacgcatcccggct
ggtgaactggctttcccgggaagggcgttgggccgcctttcggacatcggctggggcaat
cgactgcgtccgatgctggcgccgggggccccggacggcccggtgcccgacgacgtggtg
caggcggcggtgagcgtcctcaccgactgggcgaagggctcgggcggctgggcctgcggc
agcccggacgcgccgccccggccggtcggtgtcgtgacggtcccctcccgtacccggccc
gcgctcgtcgcctcgctcggcgcacgcatcgcggagatcggccggatgccgctgctcggc
tccctcgcctacgccgacggcccggcgggtgagcggatcgcgcagtccaacagcgcgcag
cgggtccgcgcgctgcaccacgccttcgtggtccccgaggccctcgcctccgcgctggcc
gaggcccaggggccggtgctgctggtggacgacgcctccgacacgggctggacgctggcc
gtcgcggcgaggctgctgcgccgcgccggagccaagggggtgtttccgctggtcctcgcc
gtgcaggcgtga
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