KEGG   Streptomyces hundungensis: DWB77_02273
Entry
DWB77_02273       CDS       T07388                                 
Symbol
sigD_1
Name
(GenBank) RNA polymerase sigma-D factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
shun  Streptomyces hundungensis
Pathway
shun02020  Two-component system
shun02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:shun00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DWB77_02273 (sigD_1)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DWB77_02273 (sigD_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shun03021]
    DWB77_02273 (sigD_1)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:shun02035]
    DWB77_02273 (sigD_1)
Transcription machinery [BR:shun03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DWB77_02273 (sigD_1)
Bacterial motility proteins [BR:shun02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    DWB77_02273 (sigD_1)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Sigma70_ECF UPF0122 HTH_23 HTH_31
Other DBs
NCBI-ProteinID: AYG80147
UniProt: A0A387HHR2
LinkDB
Position
complement(2540113..2540955)
AA seq 280 aa
MPQHTSGSDRTAAPPAARGSGTVRPSAPSSVDQLWRSYKASGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIERAIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARAVERAYATLEAQLRRTPSEIEVASEMGIAVEELHAVFSQLSLANVVAL
EELLHVGGESGDRLSLMDTLEDTSADDPVEVAEDRELRRLLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq 843 nt   +upstreamnt  +downstreamnt
atgccccagcacacctccgggtctgatcgcacggcagcgcccccggctgcccgcggcagc
ggcaccgtgcggccatcggcaccctcgtccgtggaccagctgtggcggtcgtacaaagcc
tccggcgacgagcggctgcgcgagcagttgatcctgcactactcgcccctggtcaagtac
gtcgcgggccgcgtgagcgtgggcctgccccccaacgtcgaacaagccgacttcgtgtcc
tctggggtcttcgggctcatcgacgccatcgagaagttcgacatcgagcgggccatcaag
ttcgagacgtacgccatcacacggatccgcggcgcgatgatcgacgaactgcgcgccctc
gactggatcccgcgctccgtacgccagaaggcgcgcgccgtggaacgcgcctatgcgacc
ctcgaagcccagctcagacgcaccccgtcggaaatcgaagtcgcctccgagatgggcatc
gcggtcgaggaactgcacgccgtcttcagccagttgtcgctcgccaacgtcgtggccctc
gaagaactgctgcacgtgggcggtgagagcggcgaccggctcagcctcatggacaccctg
gaggacacctccgccgacgaccccgtcgaagtcgccgaggaccgcgaactgcgccggctg
ctcgcccgggcgatcaatacgcttcccgaacgcgagaagaccgtcgtcacgctctactac
tacgagggcctcaccctcgccgagatcggcaacgtcctcggggtcaccgagagccgagtg
agccagatccacaccaagtcggtgctccagctgagggccaaactggcggacgtcgggcgc
tga

DBGET integrated database retrieval system