Streptomyces hundungensis: DWB77_02273
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Entry
DWB77_02273 CDS
T07388
Symbol
sigD_1
Name
(GenBank) RNA polymerase sigma-D factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
shun
Streptomyces hundungensis
Pathway
shun02020
Two-component system
shun02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DWB77_02273 (sigD_1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DWB77_02273 (sigD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shun03021
]
DWB77_02273 (sigD_1)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shun02035
]
DWB77_02273 (sigD_1)
Transcription machinery [BR:
shun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWB77_02273 (sigD_1)
Bacterial motility proteins [BR:
shun02035
]
Flagellar system
Flagellar assembly proteins
Stator
DWB77_02273 (sigD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AYG80147
UniProt:
A0A387HHR2
LinkDB
All DBs
Position
complement(2540113..2540955)
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AA seq
280 aa
AA seq
DB search
MPQHTSGSDRTAAPPAARGSGTVRPSAPSSVDQLWRSYKASGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIERAIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARAVERAYATLEAQLRRTPSEIEVASEMGIAVEELHAVFSQLSLANVVAL
EELLHVGGESGDRLSLMDTLEDTSADDPVEVAEDRELRRLLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgatcgcacggcagcgcccccggctgcccgcggcagc
ggcaccgtgcggccatcggcaccctcgtccgtggaccagctgtggcggtcgtacaaagcc
tccggcgacgagcggctgcgcgagcagttgatcctgcactactcgcccctggtcaagtac
gtcgcgggccgcgtgagcgtgggcctgccccccaacgtcgaacaagccgacttcgtgtcc
tctggggtcttcgggctcatcgacgccatcgagaagttcgacatcgagcgggccatcaag
ttcgagacgtacgccatcacacggatccgcggcgcgatgatcgacgaactgcgcgccctc
gactggatcccgcgctccgtacgccagaaggcgcgcgccgtggaacgcgcctatgcgacc
ctcgaagcccagctcagacgcaccccgtcggaaatcgaagtcgcctccgagatgggcatc
gcggtcgaggaactgcacgccgtcttcagccagttgtcgctcgccaacgtcgtggccctc
gaagaactgctgcacgtgggcggtgagagcggcgaccggctcagcctcatggacaccctg
gaggacacctccgccgacgaccccgtcgaagtcgccgaggaccgcgaactgcgccggctg
ctcgcccgggcgatcaatacgcttcccgaacgcgagaagaccgtcgtcacgctctactac
tacgagggcctcaccctcgccgagatcggcaacgtcctcggggtcaccgagagccgagtg
agccagatccacaccaagtcggtgctccagctgagggccaaactggcggacgtcgggcgc
tga
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