Streptomyces hundungensis: DWB77_03293
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Entry
DWB77_03293 CDS
T07388
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shun
Streptomyces hundungensis
Pathway
shun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB77_03293 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shun03019
]
DWB77_03293 (recQ_2)
03400 DNA repair and recombination proteins [BR:
shun03400
]
DWB77_03293 (recQ_2)
Enzymes [BR:
shun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWB77_03293 (recQ_2)
Messenger RNA biogenesis [BR:
shun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DWB77_03293 (recQ_2)
DNA repair and recombination proteins [BR:
shun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DWB77_03293 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AYG81151
UniProt:
A0A387HEU4
LinkDB
All DBs
Position
complement(3677756..3679618)
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AA seq
620 aa
AA seq
DB search
MSAVGGTQTRTAETEALRTLHRVFGYDAFRGAQGEVIEHVVAGGDAVVLMPTGGGKSLCY
QIPALVRPGTGVVVSPLIALMQDQVDALRALGVRAGFINSTQDFDERRTVEAELLAGELD
LLYLAPERLRVEATLDLLSRAKISVFAIDEAHCVAQWGHDFRPDYLALSLLGERWADVPR
IALTATATDATHREITQRLGMPDARHFVASFDRPNIQYRIVPKNDPKKQLLAFLKEEHDG
DAGIVYCLSRASVDKTAQYLSDNGVQAVPYHAGLDGGTRALHQSRFLREEGLVVVATIAF
GMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPSTAWMAYGLQDVVQQRKMIQGGE
GDEAFRRRAAAHLDAMLALCETASCRRAQLLGYFGQEAPAANCGNCDTCLTPPQTWDGTV
AAQKALSTVVRLQRERNQKFGAGQIIDILLGRRTAKVIQFDHDALSVFGIGEDLSEPQWR
GVVRQLLAQGLLAVEGEYGTLVLTEASGEVLGGRREVRMRTEPEKAVRAASRSASKKSAA
AAADLPPEVVPVFEALRAWRGAQAKEAGVPAYVIFHDATLREIATVRPGSLEELSAVGGV
GEAKRAKYGEAVLTVLSEAP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagtgggtggaacgcagaccaggaccgcggagaccgaagccctgcggaccctg
caccgcgtcttcggatacgacgcattccgaggcgcccagggcgaggtcatcgagcacgtc
gtggcgggcggcgacgccgtcgtcctcatgcccaccggcggtggaaagtcgctctgctac
cagatccccgcgctggtcaggccaggtacgggcgtcgtggtctcccccctcatcgccctg
atgcaggaccaggtcgacgcgctgcgcgccctcggcgtacgcgccgggttcatcaactcc
acgcaggacttcgacgagcgccgcacggtcgaggccgagcttctcgccggcgagctcgac
ctgctctatctggcccccgagcggctccgcgtggaagccaccctcgacctcctctcccgc
gccaagatctccgtcttcgccatcgacgaggcgcactgcgtcgcccagtggggccacgac
ttccgccccgactacctcgccctgtccctgctcggcgagcgctgggccgacgtgccccgt
atcgcgctcaccgccaccgccacggacgccacccaccgcgagatcacccagcgcctcggc
atgccggacgcccggcacttcgtggcgagcttcgaccggccgaacatccagtaccggatc
gtgccgaagaacgacccgaagaagcagctcctcgccttcctcaaggaggagcacgacggg
gacgcgggcatcgtctactgcctctcgcgggcctcggtggacaagaccgcgcagtacctg
agcgacaacggcgtccaggccgtcccgtaccacgccgggctcgacggcggcacgcgcgcg
ctccaccagtcccgcttcctgcgggaggagggcctggtggtggtggcgaccatcgccttc
gggatgggcatcgacaagccggacgtgcggttcgtggcccacctcgacctgcccaagtcg
gtcgagggctactaccaggagaccggccgcgcgggacgtgacggcatgccctccacggcc
tggatggcgtacgggctccaggacgtcgtgcagcagcggaagatgatccagggcggcgag
ggcgacgaggcgttccggcgccgggccgccgcccacctcgacgcgatgctggcactctgc
gagaccgcctcgtgccggcgtgctcaactgctcggctacttcgggcaggaggccccggcc
gcgaactgcggcaactgcgacacctgcctgaccccgccgcagacgtgggacggcacggtg
gccgcgcagaaggcgctctccacggtcgtacgcctccagcgcgagcggaaccagaagttc
ggcgcgggccagatcatcgacatcctgctcggccgcaggaccgcgaaggtcatccagttc
gaccatgacgcgctgtccgtcttcggcatcggcgaagacctctccgagccgcaatggcgg
ggcgtggtacggcagttgctcgcccaggggctgctcgcggtggagggcgagtacggcacg
ctggtgctgaccgaggcgagcggggaggtgctcggcggccgacgggaggtccggatgcgg
acggagcccgagaaggcggtgcgggcggcttcgcggagcgcgtcgaagaagtccgccgcg
gcggcggccgacctgccgcccgaggtggttccggtcttcgaggcgctgcgggcgtggcgg
ggggcgcaggcgaaggaggcgggggttccggcgtatgtcatcttccacgatgcgacgttg
cgggagatcgcgacggttcggccggggtcgttggaggagttgtccgcggtgggtggggtg
ggggaggcgaagcgggcgaagtacggcgaagcggtgctgaccgtactgtccgaagccccc
tag
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