Streptomyces hundungensis: DWB77_04232
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Entry
DWB77_04232 CDS
T07388
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shun
Streptomyces hundungensis
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shun03032
]
DWB77_04232 (topA)
03400 DNA repair and recombination proteins [BR:
shun03400
]
DWB77_04232 (topA)
Enzymes [BR:
shun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DWB77_04232 (topA)
DNA replication proteins [BR:
shun03032
]
Prokaryotic type
DNA Topoisomerases
DWB77_04232 (topA)
DNA repair and recombination proteins [BR:
shun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DWB77_04232 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AYG82063
UniProt:
A0A387HIJ1
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All DBs
Position
4700787..4703606
Genome browser
AA seq
939 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVRKLKELLAESDELFLATDEDREGEAIAWHLQEVL
KPKVPVHRMVFHEITKDAIRDAVANPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFSTGRTGDASDPSTLVARLNTVD
GRRVAQGRDFGPDGQLKSDVLHLDEANARSLAAALADSSFAVRSVESKPYRRSPYAPFRT
TTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAISAARAQVTQLYGAN
YLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMKD
AVGNSVTVKIAGRASDGRQAEFTASGKTITFHGFMKAYVEGADDPNAELDDRERRLPLVA
EGDALSSEEISVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKKG
TALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQSVPWLKRFYFGEGDA
ATAGAASAAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGEGIVLRVGRYGPYVERGEK
DSEGHQRADVQDDLAPDELTVEYAEELLAKPSGDFELGADPVSGNQIVAKDGRYGPYVTE
ILPEGTPKTGKNAVKPRTASLFKSMALDTVTLDDALKLMSLPRVVGVDAEGVEITAQNGR
YGPYLKKGTDSRSLETEDQLFSITLDEALAIYAQPKQRGRAAAKPPLKELGVDPVSEKPV
VVKDGRFGPYVTDGETNATLRTGDSVEEITPERGFELLAEKRAKGPAKKTAKKAPAKKAA
AKKAPAKKTAAKKTTAAKTTAAKKAPAKKTAAKKATAAE
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcaaagggcggccgccgactcgtcatcgtcgagtctcct
gccaaggcgaagacgatcaagggctacctcggccccggttatgtcgtcgaggcgagcgtc
gggcacatccgcgacctgccgaacggcgccgccgaggtgcccgagaagtacaccggcgag
gtgcgccggctcggcgtggacgtcgaacatgacttccagccgatctacgtcgtcaacgcc
gacaagaaggcccaggtcaggaagctcaaggagcttctggccgagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaagccatcgcgtggcacttgcaggaagttctg
aagcccaaggtcccggtccaccggatggtcttccacgagatcaccaaggacgccatccgg
gacgccgtcgccaacccgcgcgagctcaaccagcgcatggtcgacgcccaggagacccgg
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcggctgtccgccgggcgcgtccagtccgtggccacccgtctcgtcgtggagcgggaa
cgcgagcgcatcgcttttcgttctgctgagtactgggacctgaccggcacgttctccacc
ggtcggacgggcgacgcctccgacccgtccaccctggtggcccggctgaacacggtcgac
ggccggcgcgtcgcgcagggccgtgacttcggccccgacggacaactcaagagtgacgtc
ctgcacctggacgaggcgaacgcgcggtccctggccgccgccctcgccgactcctccttc
gcggtgcgctcggtggagtccaagccctaccgccgctcgccgtacgccccgttccgtacg
accacgcttcagcaggaggcctcgcgcaagctgggcttcggcgccaaggcgaccatgcag
gtcgcccagaagctgtacgagaacggcttcatcacctatatgcgtacggactccacgacg
ctgtccgacacggccatctcggccgcccgggcgcaggtgacgcagttgtacggcgccaac
tatctgccggacaagccccgcacctacgcggggaaggtcaagaacgcgcaggaggcgcac
gaggcgatccgcccttcgggtgatcgtttccgcacccccgccgagaccggcctcaccggc
gaccagttccggctctacgaactgatctggaagcggaccgtcgcttcccagatgaaggac
gcggtcggcaactcggtgaccgtgaagatcgcgggccgggcgagcgacggccggcaggcc
gagttcaccgcctccggcaagacgatcaccttccacggcttcatgaaggcctatgtggaa
ggcgccgacgacccgaacgccgagctcgacgaccgcgagcgccgcctgccgctggtggcc
gagggcgacgcactgtcgtccgaggagatctcggtggacggccacgcgaccaagccgccg
gcccgctacaccgaggcctcgctggtcaaggagctggaagagcgcgagatcgggcgtccc
tcgacgtacgcctcgatcatcggcacgatcctggaccgcgggtatgtgttcaagaagggc
acggcgctcgtcccgtcgttcctgagcttcgccgtggtcaacctcctggagaagcacttc
ggccggctcgtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatcgca
cgcggcgaggcccagtcggtgccgtggctgaagcgtttctacttcggcgagggcgacgcg
gcgacggccggtgccgcctcggccgcgggcaacggcgacggggaccacctgggcgggctc
aaggagctcgtcaccgacctcggcgcgatcgacgcccgcgagatctcctcgttccccgtg
ggcgagggaatcgtgctccgcgtcggccgctacggcccgtacgtcgagcgcggcgagaag
gactccgagggccaccagcgcgcggacgtgcaggacgacctggcgcccgacgagctgacc
gtcgagtacgcggaggaactgctcgccaagccgagcggcgacttcgagctgggcgcggac
ccggtgagcggcaaccagatcgtcgccaaggacggccgctacggcccgtacgtcaccgag
atcctgcccgagggcaccccgaagaccggcaagaacgcggtcaagccgcggaccgcctcg
ctcttcaagtcgatggccctggacaccgtcaccctggacgacgccctcaagctgatgtcg
ctgccccgcgtggtcggcgtcgacgccgagggtgtcgagatcaccgcgcagaacggccgc
tacgggccgtatctgaagaagggcaccgactcgcgctccctggagaccgaggaccagctc
ttctccatcacgctcgacgaggcgctggcgatctacgcccagcccaagcagcgtggccgc
gccgccgccaagcccccgctcaaggagctcggcgtcgacccggtcagcgagaagccggtc
gtggtgaaggacggccgcttcggcccgtacgtcaccgacggcgagaccaacgcgacgctc
aggaccggcgacagcgtcgaggagatcaccccggagcggggcttcgagctgctcgccgag
aagcgcgccaaggggcccgccaagaagacggcgaagaaggccccggccaagaaggccgcc
gcgaagaaggcacctgccaagaagacggcggcgaagaagacgacggcggccaagacgacc
gccgcgaagaaggctcccgcgaagaagaccgcggccaagaaggccacggccgcggagtag
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