Streptomyces hundungensis: DWB77_04608
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Entry
DWB77_04608 CDS
T07388
Symbol
sigF_9
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shun
Streptomyces hundungensis
Brite
KEGG Orthology (KO) [BR:
shun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shun03021
]
DWB77_04608 (sigF_9)
Transcription machinery [BR:
shun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWB77_04608 (sigF_9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
HTH_10
HTH_24
HTH_3
Sigma70_ECF
MarR
HTH_28
HTH_AraC
HTH_20
Apolipoprotein
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AYG82432
UniProt:
A0A387HNL4
LinkDB
All DBs
Position
complement(5143183..5144085)
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AA seq
300 aa
AA seq
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MSPRLDESYADTSIKQDPQDIRPPHARSHETEGLEGLPEIPPFTEVGPVDARALSKTLFA
RLDTLEEGTHEHAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFE
FDRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRSATV
GELAERLGITKEEVVEGMAASNAYTASSLDAQPEEDDSEGSLNNRIGYEDHDLEGVEYIE
SLKPLIAELPARDKKILSLRFVANMTQSEIGEELGISQMHVSRLLSRTLGKLRKGLTLDE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaatcgtacgcggatacgtcgatcaagcaggacccgcaggac
atccgccccccacacgcacgatcgcacgaaacagagggacttgagggccttcccgagatc
ccgcccttcaccgaggtcggccccgtcgacgcgcgggcgctgtcgaagacgctgttcgcc
cgtctcgacaccctcgaagagggcacccacgagcacgcttacgtgcgcaacaccctggtc
gaactgaacctcgccctggtcaagttcgccgcgtcgcgcttccgctcccgcagcgagccg
atggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatcgaccggttcgag
ttcgaccgcggtgtggaattccccaccttcgcgatgccgaccatcgtcggcgagatcaag
cgcttcttccgcgacacctcctggtcggtgcgggttccgcgcagactccaggagctccgc
ctcgacctcgccaaggcgggcgacgaactcgcccagcagctggatcgctcggccacggtg
ggcgagctcgccgaacgcctcggcatcaccaaggaagaagtcgtcgaaggcatggcggcg
agcaacgcgtacaccgcgagctcgctggacgcgcagcccgaggaggacgactccgaaggc
tcgctcaacaaccgcatcggctacgaggaccacgacctcgaaggcgtcgagtacatcgag
tcgctgaagccgctgatcgcggaactgcccgcgcgggacaagaagatcctgtcgctgcgc
ttcgtcgccaacatgacgcagtccgagatcggcgaggagctcggcatctcccagatgcac
gtctcccggctgctctcgcgcaccctgggcaagctccgcaaggggctgacgctcgacgaa
tga
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