Streptomyces hundungensis: DWB77_07344
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Entry
DWB77_07344 CDS
T07388
Symbol
lgrD_6
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
shun
Streptomyces hundungensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
NAD_binding_4
PP-binding
AMP-binding_C
Epimerase
PapA_C
GDP_Man_Dehyd
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
AYG85128
UniProt:
A0A387HSJ0
LinkDB
All DBs
Position
8183145..8190743
Genome browser
AA seq
2532 aa
AA seq
DB search
MTGFQLEDVLPLTPLQAGMLFHALYDSDAVDVYTAQFVFDLEGPVSPTALRAAVAGLLRR
HANLRVGFLHEDLDQPVQAVAAEVPTPLEELDLTGADAAGTAQERLAAFLAADRTRRFDL
TTPPLLRFTLVRTAPRRSRLVMTSHHILLDGWSMPLLVRELFELYAAHGDDSALPRVAPY
RTYLAWLAGQDRTAALDAWRAALAGIEAPTLLAGRAVTDAPRSGDLPRTLVLDLDPATTS
RLRETARAHRLTLNTLVQGAWGLLLGHLTGRPDVLFGTTVSGRPPEIPGIETMVGLFINT
VPVRLRPEPGETLAALLSRLQEEQGRLLGSQHLGLTEIRGTTGLDELFDTLAVFENYPMD
AEALRTAQQALPDLAVTGFSGTDAAHYPLTLTIAPGDALRITFGYREAVLDRDEVARIVA
RTRRILTAMAAGLERRADAVPVLLDGEENELLRQGRGAPLREDPTTVSIPDAVAQHAARH
PHAVAVSGADGQLTYRQLLDACDETARALTGLGVRAEDGVGILTGRSTAQVTASLAALRA
GGAYVPLDPRWPAERLGRVAEVASLRALVVDATTRTHPWVRALGPDVAVLTVDADGRAEQ
GSSAARGPLPTVPGGDRLAYVMFTSGSTGLPKGVGVTHADITALARDRTWADGASEAVLL
HSAYVFDASTFELWVPLLTGGRVVVAPEGTLQPAVLRDLVARHGVTAAFLTTALFDVIAE
ADPGALGLLRLVASGGEAAAPGVHQRLAAAHPDTVFLNAYGPTETTTFATLHHVRADDAP
GQAPAIGRPLDGMRGYVLDRALRPVPTGAEGELYIAGPGVARGYLGRPDLTATRFVADPF
AATGERMYRTGDLVRRDADGVLHYVARADQQIKLRGHRIEPGEIEMVLCADPSVRSACVL
VREDLPGDRTLTAYVVPVPGHLPDPDRLRAHIGRHLPAYMVPTAFHTLDEFPLTLNGKID
RAALPAPAVPAGTPGRAPGNAREEILAGLFAEVLGLPGVGVDDDFFALGGHSLLATRLVG
RLRSALDTETEIRTLFDNPTVATLARALEGAEHSARPALVPQPRTGPLPLSYAQHRLWFL
HRLEGPSATYNIPFAVRLDGPLDTQALRQALHDIVDRHAALRTVFPEDENGPHQHITPPG
EARLPFTVETIGAAELPDRIGAAATRPIDIEHCLPIRATLLRLAEDAHVLVLVIHHIAAD
GTSLAPLSRDLATAYRARVETQTAPSWSELPVDYADYALWQRAMLGDEHDPESLVSRQLA
YWEKALRDLPEMVDLPWDRPRPAVPSHTGATHDFGLDRATAQGIRDLARAGGCSVFMVLQ
AALAVVLSRHGAGEDIPLGTAVAGRTDEAASELVGFFVNTLVLRTDLSGDPTFRDLLDRV
KDVNLSAHAHQDVPFERLVELLNPARSQNHHPLFQTMLVLQNHTHAAPLDLPGLTVGAVP
ARPAVSKFDLSFTFTETPGDGGATDAAATGGMRAAVDYATELFDAATVRDLADRLTLLLT
AVTADPDRPLHTYDVLLPGERARVAAWGTGPVEDLPAATVPALFEQRVRDTPDAPAVRDA
HTTLTYAELDARAADLAGRLAALGIGPEDRVAVALPRTRELVVALLGVLKAGAAYVALDP
DYPAQRLTYMLDDARPRLLLTTPEVHRRLPESAVPHLHLTDLPNTTPPTGGPASRTAGNL
RPEHPAYVIYTSGSTGRPKGVVVTHRGAGAMARTQIERLRVTPARRVLHMASVSFDAAFW
ELCMALLSGACLEIDERDALMPGPALAALIEQREITHLTLPPAALAVMAPGSLPAGTTVV
LAGEACSPTLVRAWAKDRFLVNAYGPTETTVCATMSGFQHADGPLAPDRAVPIGTPVNGT
RVHVLDDRLAPVPPGVTGELYVSGEGVARGYHGRAGLTASRFVADPFDRAGGRMYRTGDL
VRWTNDGELVYVSRADDQVKLRGFRIELGEIEAVLTALPGVAAACAVVREDRPGDRRLVA
YTVPADGTRGPDQAEVRAHLADTLPDHMIPAACVRLEALPVTPNGKTDRRALPAPDRVGP
AGGRAPRTARERVLCEVFAETLGLPEVGVTDDFFALGGHSLLAVSLARRIGERCGRRLSL
RALFAAPTVEGVDRLLGLAPGDDGRAGTDAPDLTADIRLAADITGHRRRRADPDTAPSRR
PSRPSPRPLLTGASGFLGAFLLRDLIELTDGPVDCLVRAENEQRAAERLRANLEHYRLWD
PRYTDLIRPVPGDLATPGLGLAAEDRTALARRLGPIVHNGARVNFAAGYAELRAPNVAGT
QELLRLLADSASPGMHYVSTTGVYAPVGRPAPVTESTPTGPPDALPDGYAQSKWVAEGLV
EAARERGLPVTIHRPGRISGDTATGACQDRDLLWQLIKGCLQAGMVPDLESGSTDWVPVD
HVSKAIVALSSTSLTGTDIYHLTNPDAPTLARVFETAAGMGHELRPVSVEQWRARVAAQE
HNAAQLFLGDEAGARREATTHASFDSTRTDKILADLGVHRPVLTEEILARYLTYFHETGF
LPEPGPVGRRAL
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgggttccagctggaggacgtactgccgctgacgccgttgcaggccggcatgctc
ttccacgcgctgtacgactccgacgccgtcgacgtctacaccgcacagttcgtcttcgac
ctcgaaggacccgtcagccccaccgcgctgcgggccgccgtcgctggcctgctgcgccgc
cacgccaatctgcgggtcgggttcctccacgaggacctggaccaacccgtgcaggccgtg
gccgccgaggtgccgacgccgctggaagagctcgacctgaccggcgcggacgccgcgggc
acggcgcaggaacgtctcgccgcgttcctcgccgccgaccggacccgccgcttcgacctc
accaccccgccgttgctgaggttcaccctggtgcgcaccgcgccgcggcgctcccggctg
gtgatgacgagccatcacatcctcctcgacggctggtcgatgcccctgctcgtccgtgaa
ctgttcgagctgtacgccgcccacggcgacgacagcgccctgccgcgcgtcgccccctac
cgcacctatctcgcctggctggccgggcaggaccgcacggccgccctggacgcctggcgc
gccgccctggccggtatcgaggcgcccaccctgctcgccggacgcgcggtcacggacgcg
ccgcgttccggcgaccttccgcgcaccctcgtcctcgacctggacccggccaccacgagc
cggctgcgcgagacggcccgtgcccatcggctgaccctcaacaccctggtccagggcgcc
tgggggctgcttctcggacacctcaccggacgccccgacgtgctgttcggcaccaccgtc
tcaggtcgcccgccggagatccccggcatcgagacgatggtcggcctgttcatcaacacc
gtgcccgtccgactgcgccccgagcccggtgagaccctggccgcactgctgagccggctc
caggaggaacagggccggctgctcggcagccagcacctgggcctcaccgagattcgcggc
accaccggcctggacgaactcttcgacacgctcgccgtgttcgagaactacccgatggac
gcggaggcgctgcgcaccgcgcagcaggcactgcccgacctcgccgtcaccgggttcagc
ggcaccgacgcggcccactaccccctcaccctcaccatcgctcccggcgatgccctgcgc
atcaccttcggctaccgcgaggccgtactggaccgcgatgaagtggcccgcatcgtcgcc
cggacgcgccgcatcctgacggcgatggcggccggactcgagcgccgcgccgacgccgtc
ccggtcctcctggacggcgaggagaacgaactcctgcgtcagggccgcggcgccccgctc
cgcgaggacccgaccaccgtgagcatccccgatgccgtcgcccagcatgccgcccgccac
ccgcacgcggtcgcggtgtccggcgccgacggacagctcacctaccggcaactcctcgac
gcctgcgacgaaacggcacgcgcgctcaccgggctcggcgtccgcgcggaggacggcgtc
ggcatcctcaccggccgctccacggcccaggtcaccgcctccctggccgccctgcgcgca
ggaggcgcctatgtgcccctcgaccctcgatggcccgccgaacgcctcggccgcgtcgcc
gaggtggcctccctgcgcgccctggtggtcgacgccaccacccgtacacacccgtgggtg
cgcgcgctcggccccgacgtcgccgtactcaccgtcgacgccgacggccgcgccgaacag
ggctcctcggccgcccgcggaccccttcccactgtgcccggcggcgaccggctggcgtac
gtgatgttcacctccggctccaccggcctgcccaagggcgtcggcgtcacccacgccgac
atcacggccctcgcccgcgaccggacgtgggcggacggagcgtccgaggcggttctgctg
cactccgcgtacgtcttcgacgcctccaccttcgagttatgggtcccgctcctgacgggc
gggcgcgtcgtggtggcccccgagggcaccctccagcccgccgtcctgcgcgacctggtc
gcccggcacggcgtgaccgcggcgttcctgacgaccgccctgttcgacgtgatcgccgag
gccgacccgggcgccctgggcctgctgcgcctggtggcctcaggtggggaagccgccgca
cccggcgtccaccaacgccttgccgccgcacaccccgacaccgtcttcctcaacgcctac
ggccccaccgagaccaccaccttcgccaccctgcaccacgtacgcgccgacgacgccccc
ggacaggctcccgccatcgggcgccccctcgacggcatgcgcggctacgtcctggaccgc
gcgctgcgccccgtcccgaccggggccgagggcgagctgtacatcgcgggccccggcgtc
gcccgcggctacctcggacgcccggacctcaccgccacccggttcgtcgccgacccgttc
gcggccaccggcgagcggatgtaccgcaccggcgacctcgtgcgccgggacgccgacggc
gtcctgcactacgtggcccgcgccgaccagcagatcaaactccgcggccaccgcatcgaa
cccggcgagatcgagatggtgctctgcgccgacccgtccgtacggtccgcctgcgtcctg
gtccgcgaggacctgcccggcgaccgcaccctgaccgcctacgtcgttccggtgccaggc
caccttccggaccccgaccggctccgcgcgcacatcgggcgccaccttcccgcctacatg
gtgccgaccgccttccacaccctcgacgagtttccgctgaccctcaacggcaagatcgac
cgggcggccctgcccgcgcccgccgtcccggccggtacgccgggccgggcaccgggcaac
gcccgcgaggagatcctcgccggcctcttcgcggaagtcctcgggctgcccggcgtcggc
gtagacgacgacttcttcgccctcggcgggcactcgctgctcgccacccgactcgtcgga
cggctacgcagcgccctggacaccgagaccgagatccgcaccctcttcgacaaccccacc
gtcgccaccctcgcccgcgccctggaaggggcggaacacagcgcccgccccgccctcgta
ccccagccacgcaccggtccgctcccgctgtcctacgcccagcaccgcctgtggttcctg
caccggctcgaaggcccctccgccacgtacaacatccccttcgcggtacgcctcgacggg
ccgctcgacacccaagccctacgccaggccctgcacgacatcgtcgaccggcacgcggcc
ctgcgcacggtcttccccgaggacgagaacgggccacaccagcacatcacgcccccgggc
gaggcacgcctgccgttcaccgtggaaacgatcggcgcggcagagctccccgaccggatc
ggcgcggccgcgacccgacccatcgacatcgagcactgcctcccgatccgggcgaccctg
ctgcgcctggccgaggacgcgcacgtcctggtcctggtgatccatcacatcgccgccgac
ggcacgtcactggcaccgttgagccgcgatctcgccaccgcctaccgagcccgcgtcgag
acccaaaccgccccgtcctggtccgaactccccgtggactacgccgactacgcgctctgg
cagcgcgccatgctcggggacgagcacgaccccgagagcctcgtgtcccgtcaactcgcg
tactgggaaaaggcgttgagggatctgccggagatggtcgacctgccgtgggaccgtcct
cgtcccgcggtgcccagccacaccggtgccacccatgacttcggcctcgatcgggccacc
gcccaggggatcagggacctcgcccgcgccgggggatgcagcgtcttcatggtgctccag
gcggccctcgcggtggtcctgtcccggcacggcgcgggcgaggacatcccgctgggcacg
gccgtggccggacgcaccgacgaggcggcgtccgaactcgtcggcttcttcgtcaacacc
ctcgtcctgcgcaccgacctcagcggcgatcccaccttccgagacctcctggaccgggtc
aaggacgtcaacctctccgcccacgcccaccaggacgtccccttcgagcgactggtggaa
ctcctcaaccccgcccgctcacagaaccaccacccgctcttccagaccatgctcgtcctc
cagaaccacacccacgccgcccccctcgatctgcccggcctcacggtgggcgccgtgccg
gcgcggcccgcggtgagcaagttcgacctctccttcaccttcaccgagacaccgggcgac
ggcggagcgaccgacgccgcagcgaccggcggaatgcgggcggccgtcgactacgccacg
gaactcttcgacgccgccacggtccgcgacctcgccgaccggctcaccctgctcctgacg
gcggtcaccgccgatcccgaccgcccgctgcacacctacgacgtcctcctgcccggcgag
cgagcccgcgtcgccgcctggggtaccggccccgtcgaggacctgcccgccgccaccgtc
ccggccctgttcgaacagagggtccgggacacgccggacgctcccgcggtccgcgacgcc
cacaccacgctcacctatgccgagctcgacgcccgcgccgccgacctcgccggccgtctc
gccgcgctgggcatcggccccgaggaccgggtggccgtcgcgctgccccgtacccgcgag
ctcgtcgtggcgctcctcggcgtcctcaaggccggcgccgcctacgtagccctggacccg
gactacccggcccagcgcctgacctacatgctcgacgacgcccggccgcgcctcctgttg
accacccccgaagtccaccggcgcctcccggagtcggcggtgccgcacctgcacctcacg
gacctcccgaacaccaccccgccgaccgggggtcctgcctcccggaccgccgggaacctg
cgcccggagcaccccgcgtacgtcatctacacctcgggttccaccggccgtcccaagggc
gtcgtggtcacccaccgcggcgccggcgccatggccaggacccagatcgaacggctgcgg
gtgacccccgcgcgccgggtgctgcacatggcctccgtcagcttcgacgccgcgttctgg
gagctgtgcatggcactgctctccggggcctgcctggagatcgacgaacgcgacgcactg
atgcccggccccgccctcgccgcgctgatcgagcaacgggaaatcacccacctcaccctg
ccgcccgccgccctcgcggtcatggcgcccggctccctgcccgcgggcacgaccgtggtc
ctcgcgggcgaggcctgctctcccaccctcgtacgggcctgggcgaaggaccgcttcctc
gtcaacgcctacggacccacggaaaccaccgtctgcgccaccatgagcggcttccagcac
gcggacggccccctcgccccggaccgcgccgtccccatcggcacccccgtcaacggcacc
cgcgtccacgtcctggacgaccggctggccccggtgccgcccggtgtcaccggcgaactg
tacgtctcgggcgagggcgtggcccggggctaccacggccgggccggcctgaccgcgtca
cgcttcgtcgccgaccccttcgaccgggcaggcggccgcatgtaccgcaccggcgacctg
gtgcgctggacgaacgacggagaactcgtctacgtctcccgcgccgacgaccaggtcaag
ctccgcggtttccgcatcgagctcggcgagatcgaggccgtgctcaccgcgctgcccggc
gtcgccgcggcctgcgcggtggtccgcgaggaccggccgggcgaccggcgcctggtcgcc
tacaccgtgcccgcggacggcacgcggggcccggaccaggccgaagtacgagcgcacctg
gccgacacgctccccgaccatatgatccccgccgcctgcgtacgcctcgaggccctgccc
gtcacccccaacggcaagaccgaccggcgtgccctgcccgcacccgaccgggtcgggccc
gccggcggccgcgcaccgcgcaccgcccgcgaacgcgtcctgtgcgaggtgttcgcggag
acgctcggcctccccgaagtcggcgtcaccgacgacttcttcgctctcggcggccactcg
ctgctcgccgtgagcctggcccggcggatcggcgagcgatgcggccgccggctctccctg
cgcgccctgttcgccgcgcccaccgtggagggcgtggaccgcctcctgggcctcgcgccg
ggagacgacggtcgggccggcacggacgcacccgacctcaccgccgacatccgcctggcc
gcggacatcaccggccaccggcgtcggcgggcggacccggatacggccccctcccgacgc
ccctcacgtccttcgccccggcccctgctcaccggcgcctccgggttcctcggggccttc
ctcctgcgcgacctcatcgaactcaccgacggcccggtcgactgcctggtgcgcgccgag
aacgaacagcgggcggcggagcgcctgcgggccaacctggagcactaccgtctctgggac
ccccgatacacggacctgatccgtcccgtccccggcgacctcgcgacccccggcctcggc
ctggcggccgaggaccgcacagcgctggcccgccgcctcgggccgatcgtgcacaacggg
gctcgggtcaacttcgccgccgggtacgccgagttgcgcgcccccaacgtggccggcacc
caggaactgctgcgcctgctcgccgactccgcctcgccagggatgcactacgtctcgacc
accggcgtctacgcccccgtgggccgccccgcccccgtaaccgaatcgaccccgacagga
ccgcccgacgcgctgcccgacggatacgcgcagagcaagtgggtcgcggaaggactcgtc
gaggcggcccgcgaacgcggactgccggtgaccatccaccggccgggccgcatcagtggc
gacaccgccaccggcgcctgccaggaccgggacctgttgtggcagttgatcaaggggtgt
ctccaggcgggaatggtgccggacctggagtccggctccacggactgggtgccggtggac
cacgtcagcaaagcgatcgtggccctctcctcgaccagcctgacggggacggacatctac
cacctcaccaacccggacgccccgaccctggcccgagtgttcgaaacggccgccggcatg
ggccacgaactgcgcccggtctccgtcgaacagtggcgggcccgcgtcgcggcccaggag
cacaacgcggcgcagctgttcctcggcgacgaggcgggggcgcggcgcgaggcgactact
cacgcgagcttcgactcgaccaggacggacaagatcctggccgacctgggcgtccaccga
cccgtgctgaccgaggaaatcctggcccgctacctgacctacttccacgagacgggcttc
ctgcccgagccggggccagtagggcggcgagctctctga
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