Salinicoccus halodurans: AAT16_05915
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Entry
AAT16_05915 CDS
T03940
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
shv
Salinicoccus halodurans
Pathway
shv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT16_05915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shv03019
]
AAT16_05915
03016 Transfer RNA biogenesis [BR:
shv03016
]
AAT16_05915
Enzymes [BR:
shv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAT16_05915
Messenger RNA biogenesis [BR:
shv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAT16_05915
Transfer RNA biogenesis [BR:
shv03016
]
Prokaryotic type
tRNA degradation factors
AAT16_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
SPATA25
DUF3072
DUF5805
Motif
Other DBs
NCBI-ProteinID:
AKG73799
UniProt:
A0A0F7HKU4
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All DBs
Position
1194090..1196204
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AA seq
704 aa
AA seq
DB search
MIESTKKVYETQWGRHKLTVEYGEVAKQANGAVLVRYGETVVLSTATASKEPKDLPFFPL
TVAYEEKLYAAGKIPGGFNKREGRPSEEATLTSRLIDRPIRPLFPDGYRHDLQVMNIVLS
VDPDASPQMAAMLGASMALGVSDIPFEGPIAGVTVGLVDGEFIINPSTEEMEKSEIDLQV
AGTKDAVNMVEAGAKEVTEDTMLKAIMFGHESIREMVVFQEEILSQLDVVKKNFELPEQD
ASLTAEMEEKAVSMGLYSAIQDPDKQAREEGINAAKDSILQTLDEEAEDYEETHAEASAI
IEKLLKNEVRRLITEEKIRPDGREPSEIRPLNSQIGLLPRAHGSGLFTRGQTQALSIATL
GGLGEHQIIDGLGVEENKRYMHHYNFPQFSVGETGPIRGPGRREIGHGALGERALLQVIP
DETAFPYTIRVVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVMKDDKYT
ILSDIQGMEDALGDMDFKVAGTEKGITAIQMDIKIEGLSEDILREALAQAHEGRSRILEN
MLATISEPRTELSKYAPKVEVMHINPDKIRDVIGPGGKKINEIIDETGAKLDIEQDGTVY
IGHSDSSMIEKAKKIIEDLTRVAEVGQVYMGEVRRVEKFGAFVNLFPGKDALVHISQLDT
KRVAKVEDVAKIGDKFLVKVTNIDNQGRVNASRKELLEDKKESN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatcaacaaaaaaggtatatgaaacacagtggggcagacacaagctcacagta
gaatacggtgaagttgccaaacaggcaaacggcgccgtattggtacgctatggagagact
gtggtactgagtactgcaacagcgtcaaaagagccgaaagacctgcctttctttccattg
actgtggcatatgaagaaaagctttacgctgccggaaaaattccgggcggcttcaataag
cgtgaaggacggccgagtgaagaggcgacattgacaagccgtctcatcgaccgcccgatc
aggcctctattcccggatggctacagacatgacctgcaggtaatgaatatcgtattatcc
gttgaccctgatgcatcccctcagatggcggcgatgcttggtgcatccatggcacttggt
gtaagtgacatcccgttcgaaggaccgattgcaggtgtcacagtagggttggtcgatggt
gagttcatcatcaatccgtcgacagaggaaatggagaaatcagaaatcgatctgcaggtt
gcgggtacgaaggatgcggtgaacatggttgaagcaggggcaaaagaagttactgaagac
actatgcttaaagcaatcatgttcggacatgagagcatcagggaaatggtagttttccag
gaagaaatactctcccagctcgatgttgtcaaaaagaattttgaactgcctgaacaagat
gcttcattgacagcggaaatggaagaaaaagcagtgtccatgggtctgtacagtgcaata
caggatccggataagcaggcgcgtgaagaaggcatcaacgctgccaaggacagcattctc
caaacgttggatgaagaagctgaagattatgaggaaacacatgctgaagcgtcggcaatc
atcgaaaagcttctgaagaatgaagtgcgcagattgattacagaggaaaaaatccggccg
gacgggcgcgagccgtcagagatcagaccgctcaactcccagataggactcctgccgcgg
gcacatggttccggtctgttcacacgcggtcagacccaggcgctttcaatcgccactctg
ggcgggctaggtgaacaccagatcattgatggactgggtgtcgaagagaataaacggtat
atgcaccattataatttcccgcagttttcagtcggtgaaaccggaccgatcagggggccg
ggccgacgtgaaatcggacatggtgccctcggggaacgtgcattgcttcaggtgattccc
gatgagacagcatttccgtatactatccgtgtcgtatccgaagtgctggaatccaacggt
tccagttcacaggcttccatctgcggttcaaccctggctctgatggatgcaggtgtgccg
atcaaggcaccggttgccggaattgccatgggtctcgtaatgaaagacgacaagtataca
atcctttcagatatacagggcatggaagatgcactgggtgacatggatttcaaagttgcc
ggcactgaaaaaggaatcacagcgatccagatggatatcaaaatcgaaggtttgagtgaa
gatatacttagggaagcacttgcacaggcacatgagggcagaagcaggatacttgagaat
atgcttgccaccatcagcgagccccgcactgaactgagtaaatatgcaccgaaagtggaa
gtaatgcatatcaatccggataagatcagggatgtcattgggccgggcggtaagaaaatc
aatgaaatcattgatgaaaccggtgcaaaactcgatattgaacaggatggaacagtctat
atcggtcacagcgactcctcgatgattgaaaaagctaagaagatcattgaagaccttacg
cgtgttgctgaagtgggccaggtctacatgggtgaagtcagacgtgttgaaaagttcggt
gcttttgttaatctgttcccgggcaaagatgcactggtccatatttcacaactggatacc
aaacgtgtggcaaaagttgaagatgttgcaaaaatcggagataaattccttgtgaaagta
accaacattgacaaccagggcagagtgaatgcatcaaggaaggaattactggaggataaa
aaggagagtaattga
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