Salinicoccus halodurans: AAT16_06395
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Entry
AAT16_06395 CDS
T03940
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shv
Salinicoccus halodurans
Pathway
shv03410
Base excision repair
shv03430
Mismatch repair
shv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAT16_06395
03430 Mismatch repair
AAT16_06395
03440 Homologous recombination
AAT16_06395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shv03400
]
AAT16_06395
DNA repair and recombination proteins [BR:
shv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAT16_06395
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAT16_06395
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAT16_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AKG73891
UniProt:
A0A0F7HK67
LinkDB
All DBs
Position
1291327..1293570
Genome browser
AA seq
747 aa
AA seq
DB search
MYQSKYEWKVRKKTADMEEETVQAFKLNNLEKTVLENRGYTAQADLNRIFRPESYDASLI
LGMESATSRIEKAIANDESILVYGDFDADGITSTVLLTNALKQKTLNVEFIIPDRISDGY
GPNMSIFEEVVVGQFDLVITVDNGISGKKEIAFLTENGVDVIVVDHHAFGENIPDVTIIH
PDHPEGSYPCNALAGVGITYKLVQALGLDRREDLALVAIGTVADLVPVIDENKKLVMEGL
EVLNDRPLLGIKSLLRSAGHDGLIDEETIGFTIAPRLNATGRLGEASIAVELLMEEDPDA
AYELSMAVERMNQERKQIVEEIHAEAAEMIDGTSQINVVYKEGWHPGVIGIVASRLVDQF
GKPAIVFTLDGESYRGSARSIEGVDLHGVLKEHSNHYTSYGGHSQALGVEVADSDIELFK
EELEQYFESLGLDLRPVKHIDYQLKSGNMTMKEFERFERLKPFGQSFRAPIFMVNNAKIG
MIRQVGKDKSHIKITIPELDLDVIGFKFGHLSHEVGNGDTISLIGTVNINEFNQKRSLQM
VLLDAGIDTVQIMDMRSRTDQQFDMISKDDVFLIQKDREKKGQNYYHYGERLPFVTGSVV
LRDLPDSLDDLTYSLNDIHVSKMILIFHSKTELFFSGIPGRNDIEKLRNVVESAEDGSIN
LARHAPPLSKKLGVTMTFLKMMTDIMEDLQIIELKNGIVYKGNVDTDWNLNESTHFRLLN
SRMEAETRLKMSSTNELKQYVRALISN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcagtcaaagtatgaatggaaagtccgcaaaaaaacggcggatatggaagaggaa
accgttcaggcgttcaaactgaacaatctggaaaagactgtcctggaaaacagaggatac
accgcccaggcggatttgaatagaatttttcgtcccgaatcctatgatgcatcgttgatt
ttgggcatggaatctgcaacgtcaagaatagaaaaggcaatcgccaatgatgagagcata
ttggtctacggtgattttgatgctgatggtattacgagcacagtgctcctgaccaatgca
ctgaagcagaagacactcaacgtggaattcatcattccggacaggatctccgatggctat
ggaccgaatatgtcgatttttgaagaagtcgtagtcggacagttcgacctggtgattaca
gtggataacgggatttccgggaaaaaggagatcgcattccttacagaaaacggcgtggac
gtcatcgtcgtcgaccaccatgcattcggggaaaatatacccgacgtgaccattatccat
ccggatcatccggaggggagctacccatgcaacgcacttgcaggtgtcgggattacctac
aaacttgtgcaggcactgggactcgatagacgggaggacctggcccttgtggccatcggc
acggtagccgatcttgttccggtcatagacgagaacaagaaactcgtcatggaggggctc
gaagtgctgaatgacagaccgctccttggtataaaatcactgctgagaagtgccgggcat
gacggactgattgatgaggaaacaatcggatttacaatcgcgccccgtctgaatgccaca
ggcaggcttggggaagcatccattgcagtcgagcttctgatggaagaagatccggatgcg
gcctacgagctgtcaatggcggtggagcggatgaaccaggaacggaaacagattgttgaa
gagatccatgcagaagcggctgaaatgatagacggcacaagccagatcaatgtggtttat
aaagaaggctggcatccgggtgtaatcggtatcgtcgcctcaaggctcgtcgaccagttc
ggcaaaccggcaatcgtgttcaccctggacggcgaatcatacaggggatctgcccgctcc
atagagggtgtggatctccacggtgtcctcaaggagcattcgaatcattataccagctac
ggcggccactcccaggctctgggtgtagaggtggcagacagtgatattgaactgttcaaa
gaagaactggaacagtactttgaatccctcggcctggatctgcggccggtcaaacacatt
gattaccagctcaagtcgggcaatatgacgatgaaggaattcgaacgctttgaacgcctg
aagccatttgggcagtcattcagggcaccgattttcatggtcaataatgcaaagatcggt
atgatccgccaggtcgggaaagataaatcccatattaaaataacaattcccgaactggat
ctggatgtcatcggcttcaagttcggccacctttcacatgaagtgggcaacggggatacg
atcagcctcatcggcacagtcaacatcaatgaattcaaccagaagcggtcgctgcagatg
gtccttctggatgcgggcattgatacggtgcagatcatggatatgaggagccgtacggat
cagcagtttgatatgatatccaaagatgacgtcttcctgattcagaaagacagggaaaag
aaggggcaaaattattaccactatggtgaacgactgcctttcgtaacaggcagtgtggtg
ctgcgcgatctgccggacagcctggatgacctgacatactcgctgaatgatatacatgta
tctaaaatgatcctgattttccacagtaaaaccgaactgtttttcagcggcatcccgggc
cggaatgatattgaaaaactgcggaatgtcgtcgaaagtgcagaagacggctcgatcaat
cttgccaggcatgcaccgccgctctcaaaaaaattgggcgtaacgatgacatttcttaaa
atgatgacagatatcatggaagatttgcagataatcgagctgaaaaatggtatagtgtat
aagggaaatgttgatacagactggaatttgaatgaatcaacacattttagacttcttaac
agccgcatggaagcagaaacgcgtctgaagatgtcctcgacaaatgaattaaaacaatat
gttagagcattaatatcaaattga
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