KEGG   Salinicoccus halodurans: AAT16_06395
Entry
AAT16_06395       CDS       T03940                                 
Name
(GenBank) hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shv  Salinicoccus halodurans
Pathway
shv03410  Base excision repair
shv03430  Mismatch repair
shv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AAT16_06395
   03430 Mismatch repair
    AAT16_06395
   03440 Homologous recombination
    AAT16_06395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shv03400]
    AAT16_06395
DNA repair and recombination proteins [BR:shv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AAT16_06395
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AAT16_06395
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AAT16_06395
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AKG73891
UniProt: A0A0F7HK67
LinkDB
Position
1291327..1293570
AA seq 747 aa
MYQSKYEWKVRKKTADMEEETVQAFKLNNLEKTVLENRGYTAQADLNRIFRPESYDASLI
LGMESATSRIEKAIANDESILVYGDFDADGITSTVLLTNALKQKTLNVEFIIPDRISDGY
GPNMSIFEEVVVGQFDLVITVDNGISGKKEIAFLTENGVDVIVVDHHAFGENIPDVTIIH
PDHPEGSYPCNALAGVGITYKLVQALGLDRREDLALVAIGTVADLVPVIDENKKLVMEGL
EVLNDRPLLGIKSLLRSAGHDGLIDEETIGFTIAPRLNATGRLGEASIAVELLMEEDPDA
AYELSMAVERMNQERKQIVEEIHAEAAEMIDGTSQINVVYKEGWHPGVIGIVASRLVDQF
GKPAIVFTLDGESYRGSARSIEGVDLHGVLKEHSNHYTSYGGHSQALGVEVADSDIELFK
EELEQYFESLGLDLRPVKHIDYQLKSGNMTMKEFERFERLKPFGQSFRAPIFMVNNAKIG
MIRQVGKDKSHIKITIPELDLDVIGFKFGHLSHEVGNGDTISLIGTVNINEFNQKRSLQM
VLLDAGIDTVQIMDMRSRTDQQFDMISKDDVFLIQKDREKKGQNYYHYGERLPFVTGSVV
LRDLPDSLDDLTYSLNDIHVSKMILIFHSKTELFFSGIPGRNDIEKLRNVVESAEDGSIN
LARHAPPLSKKLGVTMTFLKMMTDIMEDLQIIELKNGIVYKGNVDTDWNLNESTHFRLLN
SRMEAETRLKMSSTNELKQYVRALISN
NT seq 2244 nt   +upstreamnt  +downstreamnt
gtgtatcagtcaaagtatgaatggaaagtccgcaaaaaaacggcggatatggaagaggaa
accgttcaggcgttcaaactgaacaatctggaaaagactgtcctggaaaacagaggatac
accgcccaggcggatttgaatagaatttttcgtcccgaatcctatgatgcatcgttgatt
ttgggcatggaatctgcaacgtcaagaatagaaaaggcaatcgccaatgatgagagcata
ttggtctacggtgattttgatgctgatggtattacgagcacagtgctcctgaccaatgca
ctgaagcagaagacactcaacgtggaattcatcattccggacaggatctccgatggctat
ggaccgaatatgtcgatttttgaagaagtcgtagtcggacagttcgacctggtgattaca
gtggataacgggatttccgggaaaaaggagatcgcattccttacagaaaacggcgtggac
gtcatcgtcgtcgaccaccatgcattcggggaaaatatacccgacgtgaccattatccat
ccggatcatccggaggggagctacccatgcaacgcacttgcaggtgtcgggattacctac
aaacttgtgcaggcactgggactcgatagacgggaggacctggcccttgtggccatcggc
acggtagccgatcttgttccggtcatagacgagaacaagaaactcgtcatggaggggctc
gaagtgctgaatgacagaccgctccttggtataaaatcactgctgagaagtgccgggcat
gacggactgattgatgaggaaacaatcggatttacaatcgcgccccgtctgaatgccaca
ggcaggcttggggaagcatccattgcagtcgagcttctgatggaagaagatccggatgcg
gcctacgagctgtcaatggcggtggagcggatgaaccaggaacggaaacagattgttgaa
gagatccatgcagaagcggctgaaatgatagacggcacaagccagatcaatgtggtttat
aaagaaggctggcatccgggtgtaatcggtatcgtcgcctcaaggctcgtcgaccagttc
ggcaaaccggcaatcgtgttcaccctggacggcgaatcatacaggggatctgcccgctcc
atagagggtgtggatctccacggtgtcctcaaggagcattcgaatcattataccagctac
ggcggccactcccaggctctgggtgtagaggtggcagacagtgatattgaactgttcaaa
gaagaactggaacagtactttgaatccctcggcctggatctgcggccggtcaaacacatt
gattaccagctcaagtcgggcaatatgacgatgaaggaattcgaacgctttgaacgcctg
aagccatttgggcagtcattcagggcaccgattttcatggtcaataatgcaaagatcggt
atgatccgccaggtcgggaaagataaatcccatattaaaataacaattcccgaactggat
ctggatgtcatcggcttcaagttcggccacctttcacatgaagtgggcaacggggatacg
atcagcctcatcggcacagtcaacatcaatgaattcaaccagaagcggtcgctgcagatg
gtccttctggatgcgggcattgatacggtgcagatcatggatatgaggagccgtacggat
cagcagtttgatatgatatccaaagatgacgtcttcctgattcagaaagacagggaaaag
aaggggcaaaattattaccactatggtgaacgactgcctttcgtaacaggcagtgtggtg
ctgcgcgatctgccggacagcctggatgacctgacatactcgctgaatgatatacatgta
tctaaaatgatcctgattttccacagtaaaaccgaactgtttttcagcggcatcccgggc
cggaatgatattgaaaaactgcggaatgtcgtcgaaagtgcagaagacggctcgatcaat
cttgccaggcatgcaccgccgctctcaaaaaaattgggcgtaacgatgacatttcttaaa
atgatgacagatatcatggaagatttgcagataatcgagctgaaaaatggtatagtgtat
aagggaaatgttgatacagactggaatttgaatgaatcaacacattttagacttcttaac
agccgcatggaagcagaaacgcgtctgaagatgtcctcgacaaatgaattaaaacaatat
gttagagcattaatatcaaattga

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