Shewanella sp. W3-18-1: Sputw3181_0138
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Entry
Sputw3181_0138 CDS
T00453
Name
(GenBank) ribonuclease T2
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shw03016
]
Sputw3181_0138
Enzymes [BR:
shw01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
Sputw3181_0138
Transfer RNA biogenesis [BR:
shw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Sputw3181_0138
Prokaryotic type
Sputw3181_0138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
ABM22991
LinkDB
All DBs
Position
complement(166995..168152)
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AA seq
385 aa
AA seq
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MTMPLRLTASPKRLQQELLRQPLMLYRIVSILLLGITPAIAAPASGEFISNKRCELFQSK
NKQTNPEQLQSNIGERYTVQEILGNTTNPQWLRVKTNAATSPLRWISGSCGQYLTSVTNN
DLSTPVSAMEPSQTTTASDIKAINRDSLKEHSTKDQRQVSHCQLEGNLDSHVLALSWQST
FCELNGNRKAECSDLNKTDESPLWQQFSLHGLWPNRKQCGTRYGYCSTVKLQPSDFCSYP
EIELNASVRKNLEEVMPSARYGTCLERHQWWKHGTCRNQEPNDYFLLATQLTQTINASAW
VKNFIHGNIGKQVTRQELNTSFDKSFGQGAHTKMSLECAKGLLSEIRINLPEVIKGSDSI
PALLAKANKAGKGSCPDTIIINNSN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccattgcgtttgaccgcaagccctaagcgtttacagcaagagcttttgcgc
caaccattaatgttatatcgcatagtcagcatattgctcctaggaataacccctgcaatc
gccgctcctgcttctggtgaatttatatccaataagcgctgtgaactctttcaatctaag
aataaacaaaccaacccagagcagttacaaagcaatattggtgaacgctatacagtacag
gaaattttagggaacacgaccaatcctcaatggctaagagtcaaaactaatgctgcaact
tcacctttgcgctggataagcggtagttgtggccaatatctcaccagcgtaacgaacaat
gacctttccacaccagtgtcagcaatggaaccctcacaaaccacgacagcatcagatatt
aaagcaatcaatcgcgatagccttaaagagcacagtacaaaagatcaacgccaagttagt
cattgtcaactcgaaggaaacttagactcccacgttctagcattgagttggcaaagcact
ttctgcgaactcaatggcaaccgtaaagcagaatgcagtgacctcaataaaacggatgaa
tctccactgtggcaacagtttagcttgcatggactttggcccaataggaaacagtgtgga
actcgttatggctattgcagtacagtaaagctacagcctagcgatttctgtagctaccct
gaaattgagcttaacgcttcggtgcgcaaaaatttagaagaagtgatgccgagcgctcgc
tacggcacctgtttagaacggcatcaatggtggaaacatggaacttgtcgcaaccaagaa
cctaacgattactttttgttagccacccagttaacccaaacaataaacgcttctgcatgg
gttaaaaacttcatccatgggaacataggtaaacaggtaactcgacaggagctaaatacc
agctttgataaaagctttggtcagggtgctcataccaaaatgagcttagaatgtgctaaa
ggactgttaagtgaaatccgcattaatctacccgaagtgattaaaggttctgattcaata
cccgctctcctcgcgaaagccaacaaagcggggaaaggctcttgtccagacacaatcatt
ataaataactccaattaa
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