Shewanella sp. W3-18-1: Sputw3181_0204
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Entry
Sputw3181_0204 CDS
T00453
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00020
Citrate cycle (TCA cycle)
shw00190
Oxidative phosphorylation
shw00620
Pyruvate metabolism
shw00650
Butanoate metabolism
shw00720
Other carbon fixation pathways
shw01100
Metabolic pathways
shw01110
Biosynthesis of secondary metabolites
shw01120
Microbial metabolism in diverse environments
shw01200
Carbon metabolism
shw02020
Two-component system
Module
shw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shw_M00150
Fumarate reductase, prokaryotes
shw_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sputw3181_0204
00620 Pyruvate metabolism
Sputw3181_0204
00650 Butanoate metabolism
Sputw3181_0204
09102 Energy metabolism
00190 Oxidative phosphorylation
Sputw3181_0204
00720 Other carbon fixation pathways
Sputw3181_0204
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sputw3181_0204
Enzymes [BR:
shw01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Sputw3181_0204
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
Thi4
DAO
Lycopene_cycl
FabD_helical_ins
Motif
Other DBs
NCBI-ProteinID:
ABM23056
UniProt:
A0A6N3J075
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All DBs
Position
complement(228225..230000)
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AA seq
591 aa
AA seq
DB search
MKTITTDVAVIGAGGAGLRAAIAAAEANPKLSIALISKVYPMRSHTVAAEGGSAAVIKDE
DSLDNHFNDTVAGGDWLCEQDVVEYFVENALREMTQLELWGCPWSRKPNGEINVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSMKYSNIVRYDEFFVLDLIVVDNEVQGVIALCIAEGE
LVCFKAKSVILATGGGGRVYHFNTNGGIVTGDGMAIAYRHGVPLRDMEFVQYHPTGLPGT
GILMTEGCRGEGGIMVNKDGYRYLQDYGLGPETPVGQPQNKYMELGPRDKVSQAFWHEQR
KGNTIKHPLGDVVHLDLRHLGEDYLKERLPFICELAKAYVNVDPAKEPIPIRPTAHYTMG
GLETDPQTETQIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGETAAKRAAEFQG
WNYDAINEQAAAVEARLDALLAQKGTENWSDVRTEMCKSMESGCGIYRDEAGMQATIDKL
AELRLRYKNIQITDKGKVFNTDLLYAIEVGFSLDVAEAMAHSAIQRRESRGAHQRLDEGC
NSRNDKDYLKHSLALYNPNSVPTIKYSEVKITKSQPQARLYGDAAKQQEKV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccataaccacagatgtggcggtcatcggcgctggtggcgcgggtcttcgcgca
gcaattgctgcagcagaggcgaatccaaagctaagtatcgctctcatttccaaagtatat
ccaatgcgctcacataccgtggctgccgaaggcggttcggctgcggtaattaaagatgaa
gacagtctggataaccatttcaatgatacggttgccggtggcgactggctatgtgaacaa
gacgttgtcgagtatttcgtcgaaaatgcactacgtgaaatgacccagttagaactctgg
ggttgtccgtggagccgaaaacctaacggtgaaattaacgtgcgccgttttggtggaatg
aagattgagcgaacttggtttgcggccgataaaacgggttttcacatgctacacaccctt
tttcaaacatcaatgaagtacagcaatatcgtgcgctatgacgaattcttcgtgctggat
ctcatcgttgtcgataatgaagtgcaaggtgttatcgccctatgtattgctgaaggcgag
ctcgtttgctttaaagccaaatcggtgatcctagcaacaggtggcggtggccgggtctac
cacttcaacaccaatggaggcatagtcactggtgatggaatggcgattgcctatcgtcat
ggcgtgccactgcgtgatatggagtttgtgcaatatcacccaacgggtttacccggtacg
gggattttgatgacggaaggatgtcgcggtgaaggcggtatcatggtcaataaagatggt
taccgttatctgcaggattatggtctagggccagaaacccccgttggtcaaccacaaaac
aaatacatggaattaggccctcgcgataaggtttctcaagcattttggcatgagcaacgt
aagggaaataccatcaaacatcctctgggagatgtagttcacttagatttacgccactta
ggtgaagactacctcaaagagcgcttaccttttatctgtgaactagcaaaggcctatgtc
aacgtagaccccgcgaaagaacccattcctattcgccctaccgcccattacaccatggga
ggtcttgaaaccgatcctcaaactgaaacccaaattaaaggcttgtttgccgttggtgaa
tgttcttcagttggcttacacggtgctaaccgccttggttctaactcgctggcagagctt
gttgtgtttggccgattagctggtgaaaccgcggctaagcgcgccgcagaatttcaagga
tggaactacgatgcgattaatgaacaagccgcagccgttgaggcccgtctcgatgcgcta
ttagctcagaaaggtacagaaaactggtctgatgtacgtactgaaatgtgtaagagcatg
gaatctggttgtggcatctaccgcgatgaagcaggtatgcaagcaacgatagataagctc
gctgagctgcgcttacgttataaaaacatccaaatcaccgataaaggcaaagtatttaat
actgatttgctctatgccattgaagtcggctttagcttagatgttgccgaggccatggca
cactccgcaattcagcgccgagaatcacgcggcgcccatcaacggctcgacgaaggctgt
aactcgcgcaatgacaaggattatctaaaacactcccttgcactctataaccctaattct
gtgccaaccatcaagtacagcgaggtgaaaattactaagtctcaacctcaagctcgcctg
tatggtgatgccgcaaaacagcaggagaaagtctaa
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