Shewanella sp. W3-18-1: Sputw3181_0378
Help
Entry
Sputw3181_0378 CDS
T00453
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_0378
Transporters [BR:
shw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sputw3181_0378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
OMP_b-brl
DUF2490
Porin_4
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
ABM23229
LinkDB
All DBs
Position
408064..409419
Genome browser
AA seq
451 aa
AA seq
DB search
MIMKKRLLTLAVTAALLSSTTQLHAAGFQLAEYSSTGLGRAFAGEAAMADNASAQGRNPA
MLTYLEGRQLSAGGIYVMPNVDVKGDVSLSSPLLGPDPVKMQGGDALDVADSALVPNFYY
SNQLNDQWTWGLAVNSNYGLATELPATHAAAIFGNKTSVTTVEFNPNVAYRINDAVSVGG
GVRIVYGEGEIGASLPGWVDGIKPSLPAQVAAMLPPGGTELKSMKGDDIGYGWQLGASWQ
ITPAHRLGLAYHSGVKLDLDGHASGVIYTGGQDVSIEGYLPLELPAFAEIASHHQLTDNW
AMHASVNWTDWSVFDQLVAYFPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVNNAWL
VRAGVALDKTAATDEWRTTTIPDSDRLWFSVGAGYQASKNLNVDFAVTYIKATGDAPINE
QQNLLNLATVNFNGEASGNVWLAGIQMSYKM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaaaacgtcttctgactttggctgtcactgcagccttgttaagttcaacg
actcaactccatgccgctggtttccaattggccgaatattcttctacaggtttaggccgc
gcctttgcaggggaagctgctatggcggataacgcctctgcccaaggtcgaaatcctgcc
atgctcacttatttagaaggacgtcagctttctgcgggtggtatttatgtgatgccaaac
gtcgatgtgaaaggtgatgtgagcctaagctcgccgttactggggccagatcccgttaaa
atgcaaggcggtgatgctctggatgtggccgatagcgcgttggtgccaaacttttattat
tcaaatcagttaaatgatcaatggacttggggcctagcggtaaactctaactatggcctc
gccacagaattacctgcaacccacgccgcggccatttttggtaataagacctcggtaacg
accgttgagtttaatcctaatgttgcttatcgcatcaatgatgcagtcagtgtaggcggt
ggtgtgcgaatcgtttatggtgaaggtgaaattggtgcttcattacccggttgggtcgat
ggtattaaaccgagtttacctgcgcaagtggctgccatgttgcccccaggcggtactgag
ctgaagagtatgaagggtgatgatattggctatggctggcagttaggcgcaagctggcag
attacccccgctcaccgtttaggtttggcttaccatagcggcgttaagctagatcttgat
ggtcatgcttcaggtgtgatttatacgggtggccaagatgtgtctatcgaaggttattta
ccgcttgaattacccgcatttgcagaaattgcatcccaccatcaactgaccgataactgg
gccatgcatgcgagtgtgaactggaccgattggagtgtatttgatcagttagtggcgtat
ttccccggcgaggttaaacctaagggtgacttagagtctgatttagtgaaagaagaacac
tttgaagataactggcgtttcgcgctgggaacgacctaccaagtgaataatgcttggtta
gtgcgtgccggtgtcgctttagataaaacggcggcaacagatgagtggcgtaccactaca
attcctgactctgaccgtttgtggttctctgtgggcgcaggttatcaggcttccaaaaat
ctgaatgttgattttgcagtgacgtatatcaaagcgacaggcgatgcgcccatcaacgaa
cagcaaaatctattaaacttagcgacagttaactttaacggcgaagcgagcggcaatgta
tggcttgcgggtattcaaatgagctacaagatgtaa
DBGET
integrated database retrieval system
