Shewanella sp. W3-18-1: Sputw3181_0404
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Entry
Sputw3181_0404 CDS
T00453
Name
(GenBank) transcriptional regulator, LysR family
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shw03000
]
Sputw3181_0404
Transcription factors [BR:
shw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sputw3181_0404
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABM23255
UniProt:
A0A6N3J0N3
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Position
445952..446980
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AA seq
342 aa
AA seq
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MLQLTQVRIWVITFKSYLRMNKNMIKGMIVFATIAEKGSMSAAAQQLNLSSSAVSQQVTK
LEMDMGISLFHRNTRNLTLTEAGSLFYENCRKVISIVDSTEQKLNNLKGIPSGELKIAAP
VGFGGGLLSEPFQYLLATHPQISLNLVMQDGPIDIVNDGIDLAICIGPLSDSNLIARHLA
DWRMLLCTSPDYLPMHHNIKHPSELAAFNRINHNYTKGELLTHHPSLECFELTGQRISVN
NMQTLIQLTLDGLGYAALPEPEVLDYLDKGVLVPLLPEWSFNTYSVYSVTSARDRQPAKV
KEALNALSQYFSQTDFNHADQLKGGSYQTEHIKSGKEHRLGT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttacaattgactcaagttagaatttgggtaatcacttttaagagttacttaagaatg
aataaaaacatgatcaaggggatgatcgtttttgcgactattgcggaaaagggatcgatg
agtgccgctgcgcagcaattaaatctcagctcgtctgcggtaagtcagcaagtgaccaag
ctcgaaatggatatggggataagtctatttcaccgaaatacccgcaacctcacgctcacc
gaggcaggcagtttgttctatgagaattgccgcaaagtgatcagtatcgttgatagcaca
gagcaaaaacttaataacttaaaaggtattccttctggagaattgaagattgcggcgcct
gtaggatttggtggtggtttattaagtgaaccttttcagtatttacttgcaactcatcca
caaataagtttgaacctcgttatgcaggatgggcccatagatatagtcaacgacggtatc
gatctggcgatttgcattggtccactctcagactcaaacttaattgcccgtcacttagcc
gattggcgtatgttgctctgtacctcacctgattacttgcctatgcatcataatatcaag
catccatctgaattagcggcatttaatcgaatcaatcacaattacactaaaggcgaactt
ttaacccatcatcctagtcttgagtgttttgagctcacggggcagcggatcagcgttaac
aatatgcagaccttaatccagcttacgcttgatgggttaggatatgccgccttaccagaa
cctgaagtgcttgattatcttgataaaggtgtattagtccccttgttacccgaatggtca
ttcaatacttacagtgtttacagtgtgacatctgcacgggataggcagcctgctaaagtc
aaagaagccttaaacgcgctcagccaatattttagtcaaactgattttaaccatgccgat
caattgaaaggtgggagttatcaaacagagcatattaaaagtggtaaagagcacaggtta
ggcacttag
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