Shewanella sp. W3-18-1: Sputw3181_0616
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Entry
Sputw3181_0616 CDS
T00453
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shw03032
]
Sputw3181_0616
03036 Chromosome and associated proteins [BR:
shw03036
]
Sputw3181_0616
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_0616
DNA replication proteins [BR:
shw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sputw3181_0616
Chromosome and associated proteins [BR:
shw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sputw3181_0616
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sputw3181_0616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABM23467
UniProt:
A0A6N3J171
LinkDB
All DBs
Position
complement(675331..675603)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIAKIAENADLTKVEAARALKSFEAAITESMKNGDKISIVGFGSFETATRAARTG
RNPQTGKEIQIAEATVPKFKAGKTLRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgaacttatcgctaagattgcggaaaatgccgatctaacaaaagtggaa
gcagcacgcgcattaaagtctttcgaagcggctatcaccgaatccatgaaaaatggtgac
aaaatttctatcgtgggctttggctctttcgaaacggccacccgtgcagctcgcacaggt
cgtaacccacaaacgggtaaagaaatccaaattgcagaagcaactgtgcctaagtttaaa
gccggtaaaaccctacgcgatagcgtcaattaa
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