Shewanella sp. W3-18-1: Sputw3181_0684
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Entry
Sputw3181_0684 CDS
T00453
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Sputw3181_0684
Enzymes [BR:
shw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sputw3181_0684
Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sputw3181_0684
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
ABM23535
UniProt:
A0A6N3J1C1
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All DBs
Position
complement(758691..760106)
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AA seq
471 aa
AA seq
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MRKHFRQMHAFAVLMLAMLTAHLSGCVATSADNAPTEFTTTTPEEIGKSDHSAQETSDTP
EPVEEQYSDVWEKIQHARTIDVHDEAEVRKQRKFFADKQRFMNQVGDRAEPFLYYIVSQL
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTINSAYDGRKDALAST
DAVLDYLQHLYDTLGNDWINAVAGYNSGELVIKSAIERNKAKGKPTDFWSLNIPARQVQT
VPKWLAFIQIIREPSHYNLKVPPIANRPFLERLPAPNGVEIGHIANAAGLTKAEFKTYNP
GFRQNVIPSKGKYQIALPIENIGAYQENQDKLYAQKRYDSQSYIVKSGDSLGAIAAKFDI
SVSELKQANNLTSDRIKVGQELTLLTPLAANDKETKVAPATPKTSSKSSAKVTETKAKTT
ETKAATYKVKSGDSLDKIARKHKVKLADLMKWNQLNAKSIIKPGQELKLSE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaacattttcgccaaatgcacgcttttgcagtgcttatgctagccatgctaacg
gcccatctcagtggctgcgtagccacctcggcggataatgcgccaacagaattcactacc
actacgcctgaagaaataggtaaaagtgaccattcagcacaagagaccagcgatacacct
gaacccgttgaagaacaatacagcgacgtatgggaaaaaattcaacatgcgcgcactatt
gacgtacacgatgaagcagaagtacgtaaacaacgtaaattttttgctgataaacaaaga
tttatgaatcaagttggtgaccgtgcagagccttttttgtattacatcgtcagtcaacta
gaagcccgtaatatgccgcttgaattagccttattacctattgttgaaagcggttataac
ccactagcgcaagccaatggtccggcgggtttatggcagatgattcctgcaactggtcgc
aattttggcctgaccattaattccgcttatgatggtcgtaaagatgcgctggcctcaact
gatgccgttctcgactacttacagcacttatacgataccctaggcaatgactggatcaac
gctgtagcgggctataacagtggtgaattggttataaaatccgcaatagaaagaaacaaa
gcaaagggaaagccaaccgatttttggtcacttaatatccctgcaagacaagtacaaaca
gtccctaagtggctcgcttttattcaaattattcgcgagcctagccattacaacttaaaa
gtgcctcccattgccaatcgccctttccttgagcgactccccgcacctaatggcgttgaa
attggccacattgccaatgcggcgggactcactaaagcagagtttaaaacctataaccct
ggtttccgtcaaaatgtgatccccagtaaaggcaaatatcaaatagcccttcccattgaa
aacatcggtgcctatcaggaaaatcaagataaactctatgcccaaaaaagatatgacagc
caaagttacatcgtcaaatcgggtgatagtctaggtgctatagcggctaagtttgatatc
tcagtgagtgagttaaaacaggcgaataacctcacatcagataggatcaaagtaggccaa
gaactcacgctattaacccctttggcggctaatgataaagagactaaagttgccccagca
acgcctaaaacaagcagtaaatctagcgccaaggtcactgaaacaaaagctaaaacgacg
gaaacaaaagcggctacttataaggtaaaatccggtgactcactggataaaatcgcccgt
aaacataaagtcaaactggctgatttaatgaagtggaaccagctaaatgctaagagcatt
attaaacccggccaagagctaaagctatccgagtaa
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