Shewanella sp. W3-18-1: Sputw3181_0834
Help
Entry
Sputw3181_0834 CDS
T00453
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shw03009
]
Sputw3181_0834
Enzymes [BR:
shw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Sputw3181_0834
Ribosome biogenesis [BR:
shw03009
]
Prokaryotic type
rRNA helicases
Sputw3181_0834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
Helicase_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABM23684
LinkDB
All DBs
Position
936740..938116
Genome browser
AA seq
458 aa
AA seq
DB search
MAFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGSGKTAAFGLGLL
NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEHG
AHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPALDAIIEQAPRERQTLL
FSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQALQLLLLEHKP
ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVA
ARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLE
REITSESLPSESLLGSTPAAPTMITLQIDGGKKEKLRPGDILGALTGENGIEGSQVGKIQ
VTDYRAYVAVNRKVAKKALNKLTGGRIKGKSYRAWPMK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctttttcgactcttaagctaaaacccgaactgcttgagaacctttcttctatgggc
tacaacgagatgacgccaattcaggcgcaaagtttgccacccattttagcggggcaggat
gtgataggtcagggtaaaactggctcgggtaaaacggccgccttcggcttaggattactg
aacaagttagacgttaaacgctttcgcattcaaaccttagtgttatgtccaacccgcgag
ttggccgaccaagtggcgcaggaaatccgtacccttgcccgtggtattcacaacgttaaa
gtactgacactttgcggcggtgtacctatggggccacaggttggctcgctggaacacggc
gcgcacattattgtgggtacgcctggccgtatcgtcgatcacttagatcgcaatcgctta
gatttaagcaatctcaacatgttagtgctcgatgaagctgatcgcatgttagaaatgggt
ttccaacccgccctcgatgcgattatcgaacaagccccgcgtgagcgtcagacgctgcta
ttcagcgcgacgttccctgagcaaattcaatcgattgctaagcaaatcatgtatgaccca
agcatggttaaagtcgaaggtaatcacgacagcttgagcatagcccaacatttctatcat
ttagatgatgacaaggcgcgtatgcaagcgctgcaattattgttgttagaacataagcct
gaaagcgcggtggtgttctgtaacactaaacgcgaaacccaaaaagtggccgatgagctt
gaaggtttaggctttagcgtattggctttgcacggtgatttagagcaaagagacagggac
gaaaccttgctgcaatttgccaacaagagtgcctgtgtcttagtggcgaccgacgttgcc
gcccgtggtttagatatcgatgcgctggatgccgtgtttaactatcatgtcgcctatgac
accgaagtgcacattcaccgtatcggtcgtactggccgtgcgggcagtaaaggcgccgct
tataccttctataacgaccaagacggttacaagattgccttgttagaagagtacttagag
cgcgaaatcaccagcgaatcactgccatctgaaagtctgctcggtagcacgcctgcagcc
ccaaccatgatcactctgcagatcgatggcggtaagaaggaaaaactgcgtccaggggat
atcttaggcgcactgacgggcgaaaacggtatcgaaggctcacaggtgggtaaaatccaa
gtgaccgattaccgcgcctatgtggccgttaatcgtaaggttgccaagaaagcactgaac
aaactgactggcgggcgtattaaaggtaaatcttaccgcgcttggccaatgaagtaa
DBGET
integrated database retrieval system
