Shewanella sp. W3-18-1: Sputw3181_0871
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Entry
Sputw3181_0871 CDS
T00453
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K19235
L,D-transpeptidase YbiS
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shw01002
]
Sputw3181_0871
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Sputw3181_0871
Peptidases and inhibitors [BR:
shw01002
]
Cysteine peptidases
Family C82
Sputw3181_0871
Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sputw3181_0871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ABM23721
UniProt:
A0A6N3J1Y2
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All DBs
Position
complement(984424..985338)
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AA seq
304 aa
AA seq
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MSMLRTTALLLTLAFPSLSALATEYPLPPPSSRLVGENHYYTVPEGKHTLEDIAAQFQLG
LSNLMEANPGVDPFLPKPGSQLLIPHQLILPNAPREGIVINVAEMRLYYYPKGKKTVEVL
PIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKEYAAKGEILPAVWPAGPDNPMGLY
ALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHEDIEHLFKTVPVGTRVQFVNQPIKATEE
PDGKRYLAVHQPLSRTIAEFESNEPVAISLPKDIVKFIAKADTDSSVIKKLLDERTGVPT
VINQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcttcgcaccacagctttattattgactttagcgttcccaagtctctccgct
ttagcaacggaataccctttaccgccgccttcaagtcggttagttggcgaaaaccattat
tacactgtgccagagggtaaacacaccctagaagatatcgcggctcaattccagctgggt
ctaagtaacttgatggaagccaatcctggtgtcgatccattcttacccaaacctggcagc
cagttattaattccacaccagttaattctgccaaacgccccgcgtgaaggcattgtgatc
aacgttgcggaaatgcgtttgtactactacccgaagggcaaaaagaccgttgaagtcctg
cctattggtattggacaaattggcaaagatacgccagaaaactgggtgactagcgttcaa
cgtaagcgtgccaatcctacgtggacaccaacaccacgtatccgcaaagaatacgcggca
aaaggcgaaattctccccgcggtatggccagcaggccctgataacccaatgggcttatat
gcgctctatattggcaacttgtatgctatccatggtactaacgccagctttggtattggt
ttacgcgtcagtcaaggatgcgtgcgcttacgccacgaagatatcgagcatttatttaaa
acagtgcctgtcggcactcgtgtacaatttgttaatcaaccgattaaagcgacagaagag
cctgatggaaaacgctatttagcggtacatcaaccgctatcgcgtactattgcagagttt
gaatcaaatgaacctgttgctatctccttacccaaggatatcgttaagtttatcgcgaag
gcggataccgattcatctgtgattaaaaaactgcttgatgaacgtactggcgtgcccacc
gttatcaatcagtaa
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