Shewanella sp. W3-18-1: Sputw3181_1038
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Entry
Sputw3181_1038 CDS
T00453
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03030
DNA replication
shw03430
Mismatch repair
shw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sputw3181_1038
03430 Mismatch repair
Sputw3181_1038
03440 Homologous recombination
Sputw3181_1038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shw03032
]
Sputw3181_1038
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_1038
Enzymes [BR:
shw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sputw3181_1038
DNA replication proteins [BR:
shw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sputw3181_1038
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sputw3181_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
KaiA_N
TraI_2_C
DUF4388
DUF6063
Motif
Other DBs
NCBI-ProteinID:
ABM23888
UniProt:
A0A6N3J2D2
LinkDB
All DBs
Position
complement(1181681..1182712)
Genome browser
AA seq
343 aa
AA seq
DB search
MRVYPDQLSRHLNQLLPCYLIFGDDPWLIETTKDQIRQLAKRQGFDEKVQLIQETGFNWN
DLTQEWQAMSLFSSKRQIELTLPQAKPGAEGSSTLQSLLQTPNPDMLLIIEGPKLSSEQT
NSKWFKTLDAQGMYIPCATPEGDQFMRWLDSRLQHFKLQLQNDARAMLYSLYEGNLLAAD
QAMQLLQLLSPTKPVSADELSHYFEDQSRFTVFQLSDALLLNKQQSALHMLAQLNGEGTA
LPILLWTLFKELNLLLNLKNEQAQGIALNTLWGKHRIWDKRKPLYQAALQRLTLEQIEYM
LVFASKIELNLKQQGKEDWTGLSHLCLLFDPKAHQHLAHITLD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagagtttatccagatcaactctctcgccacctcaatcaactattgccctgttacctg
atttttggcgatgatccttggttaattgaaacaactaaggatcaaatacgccaattggct
aaacgccaaggtttcgatgaaaaagtccaactgatccaagaaacgggctttaattggaat
gatctcacacaggaatggcaggctatgagtctgttttccagtaaacgccagatagaactt
acacttccccaagctaaacccggcgcagaaggctcgagtacattacaatccctattacag
acgcccaatcctgatatgttactgattatcgaggggccaaaactgtctagcgaacaaact
aacagcaaatggtttaagactctcgatgcccagggtatgtatattccctgcgcaacgccc
gagggggatcagtttatgcgctggctcgactcacgccttcagcactttaagctacaactg
caaaatgatgcccgcgctatgctgtattcactgtatgaaggtaacttactcgcagccgat
caagccatgcaactattgcaactgttaagcccgaccaaacccgttagtgcagatgaactc
agccactattttgaagatcagtcccgctttaccgtgtttcaactcagtgacgcgctactg
ctcaataaacaacaaagtgcactgcatatgttagcccaacttaatggtgagggtactgct
ttacctatcttgctatggaccttattcaaagagctaaacctgctactcaatctcaaaaat
gagcaagcgcaaggcatagcgttgaatactctttggggaaaacatcgtatttgggataag
cgtaaacccttgtatcaagcggctttgcaacgactaacactagagcaaattgagtatatg
cttgtatttgcatccaagattgagcttaatttaaaacaacagggtaaagaagattggacg
gggcttagtcatctttgtctgttatttgaccctaaagcccatcaacatttggcccatata
accttagattaa
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