Shewanella sp. W3-18-1: Sputw3181_1114
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Entry
Sputw3181_1114 CDS
T00453
Name
(GenBank) Integrase, catalytic region
Organism
shw
Shewanella sp. W3-18-1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_23
HTH_24
HTH_3
GerE
HTH_10
HTH_28
Sigma70_r4_2
Chap-C
Sigma70_r4
HTH_IclR
HTH_31
HTH_38
HTH_Crp_2
HTH_29
HTH_37
HTH_40
HTH_1
HTH_26
GntR
Motif
Other DBs
NCBI-ProteinID:
ABM23963
UniProt:
A0A6N3J2B0
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Position
complement(1263607..1265148)
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AA seq
513 aa
AA seq
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MPAKRLSMRKIKEVLRLKWERGLSNRQVAAACGISRPTVSEYLRRAAEAELGWPLPEDLS
EAQLEQRLFPPPPDLPAQVRGIPDWQRIHDELRGKNVTLFLLWQEYREANPDGYQYSWFC
EHYRAWQGKLDLVMRQDHRAGEKLFVDYAGHTVPVIDRTTGEIHEAQVFVAVMGASNYTY
AEATWSQTLPDWIGSHIRTFEFLGGVPELVVPDNLRSGVSKAHRYEPDLNPTYQDMASHY
GVAVVPTRVRKPRDKAKVEGGVLIVERWILAALRHRQHFSLGQLNATIRELLEKLNSRPF
RKLPGCRLDHFKQLDQPVLQPLPAEPYVYAEWKKARVHIDYHVAIDGHYYSVPYTLIKKE
VEVRITHNTIECFHRGNRIASHRRSDQKGRHSTIAAHMPESHRQAGEWNPERLTAWAAKT
GPATEKLIRTALGARKHPQQAYRSCLGILRLGQSYGGSRLEAACQRALMLGSCRYKSIES
ILKHRLDEQPLEEQQELALPDTHDNIRGPAYYH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgaagaggttatccatgcgtaaaatcaaagaagtccttcgcctcaagtgggag
cgagggcttagcaaccgacaggttgccgcagcctgcggcatcagtcgccccactgtgagc
gagtatctgcggcgtgctgctgaggcggagcttggctggccgctgccagaggatctgagt
gaagcccagctggagcaacggctgttcccgccaccaccggatctaccggcacaggtccga
ggcattccagactggcagcggatccacgatgagctccggggcaagaacgtcaccctgttc
ctgctctggcaggagtaccgggaagccaatccggatggctaccagtacagctggttctgc
gagcactaccgggcctggcagggcaagctggatctggtgatgcgtcaggaccaccgagcc
ggtgaaaagctgttcgtggactatgctgggcacacggtgcccgtcattgatcgcaccacc
ggtgagatccatgaggcgcaagtctttgtggcggtgatgggtgcgtccaattacacctac
gccgaggccacctggagccagacactgccggactggatcggctctcacatccggactttc
gagttcttgggcggcgtgccggaactggtggttccggataacctccgttccggcgtcagc
aaggcccatcgctacgagccggatctcaatccgacctatcaggatatggctagccattat
ggcgtggccgttgtccccacacgggttcgcaagccccgtgacaaggccaaggtggaaggt
ggcgtattgatcgttgagcgctggatcctggcggccctgcgccaccgtcagcacttctcc
ctggggcagctcaacgccaccatccgtgagctgttggagaagctcaatagccgccccttc
cgcaagttgcccgggtgccggcttgatcacttcaaacagctggaccagccggttctacaa
ccgctacccgccgagccgtatgtctacgccgagtggaaaaaagcccgggtacacatcgac
taccacgtggccatcgatgggcattactactcggtgccctacaccctgatcaagaaagag
gtggaggtccggatcacccacaacaccatcgaatgcttccaccgaggcaaccggatcgcc
agccaccggcgttcggatcagaagggtcggcatagcaccatcgccgctcacatgccggag
tcccaccgccaagccggcgagtggaacccagagcgactgaccgcctgggcagccaagact
ggaccggcaactgaaaagcttatccgtaccgcgctgggggcaagaaagcatccgcaacag
gcctatcggtcctgtctgggcattctccggttggggcagagctacggcgggtcgcggctg
gaggccgcctgccaacgcgccctgatgctgggcagctgccgatacaagagcatcgaatcc
atcctcaagcaccgcctggatgagcagcccctggaagagcaacaagaactggccttacct
gacacacacgacaacatccgcggccctgcctactaccactga
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