Shewanella sp. W3-18-1: Sputw3181_1232
Help
Entry
Sputw3181_1232 CDS
T00453
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00260
Glycine, serine and threonine metabolism
shw00460
Cyanoamino acid metabolism
shw00630
Glyoxylate and dicarboxylate metabolism
shw00670
One carbon pool by folate
shw00680
Methane metabolism
shw01100
Metabolic pathways
shw01110
Biosynthesis of secondary metabolites
shw01120
Microbial metabolism in diverse environments
shw01200
Carbon metabolism
shw01230
Biosynthesis of amino acids
shw01240
Biosynthesis of cofactors
shw04981
Folate transport and metabolism
Module
shw_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sputw3181_1232
09102 Energy metabolism
00680 Methane metabolism
Sputw3181_1232
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sputw3181_1232
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sputw3181_1232
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sputw3181_1232
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Sputw3181_1232
Enzymes [BR:
shw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sputw3181_1232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABM24075
UniProt:
A1RHD0
LinkDB
All DBs
Position
1394885..1396138
Genome browser
AA seq
417 aa
AA seq
DB search
MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYEEMERIAIEHKPKMMIGGFSAYSGI
VDWAKMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGVIL
SAADDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVE
VFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAESKELTGWICDILDDANNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcaattcag
aatgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatggaagcgcaaggttcacagttaaccaataagtacgctgaaggctatcca
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgaa
cgtgctaaacaactgtttggcgcaacttacgctaacgtacaacctcattcaggttcacag
gcaaacagcgctgtttacatggcattgttaaaacctggcgataccgtattgggcatgaac
ttagcccacggtggtcacttgacccacggttcacccgttaacttctctggcaaactgtac
aacatcattccttacggtatcgacgagtctggcaaaattgactacgaagagatggaacgt
attgccatagaacacaagcctaagatgatgatcggcggtttctctgcctattcaggtatc
gttgactgggcaaaaatgcgtgaaatcgcagataaaataggtgcttacctatttgttgat
atggcgcacgttgccggtcttattgctgcgggcgtttatccaaacccagtaccacacgcg
cacgttgtgacatctacgacccacaaaaccttagcgggtcctcgtggtggcgtgatctta
tctgctgctgacgatgaagacttgtacaaaaagttgaactctgcggtattcccaggcggt
caaggtggcccattgatgcacgttatcgctggtaaagcggtggcgttcaaagaagcccta
gagccagaatttaaagtttaccaacagcaagtggttaacaacgctaaagctatggttgaa
gtgttccttgagcgcggttacaaaatcgtctctggcggaaccagcaaccacttaatgcta
gttgacctgattggtcgtgacttaacgggtaaagaagccgatgccgccttaggtagtgct
aacattaccgtgaacaaaaactcagtgccaaatgatccacgttcaccctttgtgacatca
ggtgtgcgtatcggtacgccagccattacgcgccgcggctttaaagaagcggaatcgaaa
gagctgaccggctggatttgtgacatccttgatgatgctaacaatcctgcagtgattgag
cgtgttaaaggccaagtattggcactgtgcgcacgcttccctgtttacggttaa
DBGET
integrated database retrieval system