Shewanella sp. W3-18-1: Sputw3181_1248
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Entry
Sputw3181_1248 CDS
T00453
Name
(GenBank) conserved hypothetical protein
Organism
shw
Shewanella sp. W3-18-1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_11
AAA_12
DUF3320
AAA_19
AAA_30
Viral_helicase1
ResIII
DEAD
SLFN-g3_helicase
NAT10_TcmA_helicase
nSTAND3
AAA_10
UvrD-helicase
IstB_IS21
AAA_22
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ABM24091
LinkDB
All DBs
Position
complement(1414370..1419139)
Genome browser
AA seq
1589 aa
AA seq
DB search
MVVEQQLERARLELLDMGLRSNPQLNYRSGSKALDIIDEQSAKIFEMLVEQENTLSFLPL
PEAYQQKIADSEDEGSFFQTDDESELPPLDLYLEQKKGAARFTDKYLQTGLVPAKLDKAL
LKLETEAHTMLQEQGVEVLYLALGFLQWNEPTNSSVSRYAPLILIPVQLMRSSARDSFKL
RYTGEDLGSNLTLAAKLRTEFKLMLPAYSDEMVITDYYQAVSDAITAQPSWRVHQDKIGL
GLFSFGKFQMYMDLDPTGWPEGKKPSQLPLIGRLFRDGFPHDAEINPADLNHPEKLHLVK
DADSSQIEAILAMKSGADLIIQGPPGTGKSQTITNIIAEAVALGKKVLFVAQKMAALEVV
KKRLDETHMGYAVLELHSHKSTKKSVLGSIAESLEQGRPQTANREQEFSDLAESKASLDA
YVHAIRASILRSGINYIEALGSLLQLKTKDPDNSLPALPFSYFEQWTAEEYSNARKLVTE
LVQQLARIGIPAAHPFSMSGRTDFSPSLQQALTSTLAEICPLLSQLDVQAQTVSVFLKLE
KPQSLQQVTPLISTTSWLSELPDLKSVKVNNPIWALEKKWIDNGLTCLANFLSLKASCEQ
HFITQALDADLLSIRQGLIGKTDKWWRFLSSSYRQAKAQLAGLWLGALPASSTDWLTALD
TALTYQSAKKELTSYHTLLSEAFGAQWQGEFSEHSELTQINSWINTFYTKVNRLELSQSL
AELIDTGLDKKLLRDHTNSLTALCTGISVQLKTLKELIQIPNSNPNHDLAAMQFTQLNVW
LEGWKNSALLYDFARYNQIIKAFEPYNIKDFTKYAYSWHAAPDLLMTVFELSYYSGLVNY
AYDSSEAIRHFDRNKHEQSLHDFKRIDGNSLFFAQEFLVNSLYERLPKKTAKGEMELVLR
ELGKKKRHIPIRKLLAEAGNVIQQVKPIFMMSPMSIATYLKQGALDFDLVIFDEASQIPA
PDALGAMLRGRQVIVVGDSKQMPPSNLFGKAVELEEEELENSATAEMESILALMEARGAA
SKMLRWHYRSRHDSLIAVSNDQFYKNKLVAFPSPGFHPDATGLKFHYLPETHYDKGGSRI
NPGEVKAVVAAVLNHALTKPHLSLGVVAFSLSQRDAILLELEKERRLQPETDEFFARHAG
GDEFFVKNLENVQGDERDVILISICYGKTSTGQLSQNFGLLNKPGGERRLNVLISRARLA
MEVFANFRGDELKVEADSPFGVRSLQIFLQFAESGQLNKAYEKEQEQNFAFGALLHQAIQ
RLGYQVATRVGSQGYYIDLAIKHPEDPSKFVLALEYDGAGYYGATSARDRERLRQSVLEG
LGWSFERIWSTDWFRDPEAELHRLKVLIDKAITQHNELMVAMAAQATNTRQVKHKVAMPE
AVAAPIMRVEEEQPEFEACTTPYKKADVSKLNIPHVDDFSAIPLSMLVHAVERIVETEYP
IFASLVATRLANAAGLTRVGAKIKRTVDQAIESAVAKGLIKLDKDEVLWPQGRSTVKLRN
WNSADTATRKLENVCDAELTNALLLTVQDAHAISVTDAASAALGLLGFQRATAQAAERMS
KLAQIQCDKNVLVCENERLKISIAKPSLP
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgagcagcaacttgaacgtgcgcgtctggaattacttgatatgggtcttcga
tccaaccctcagctaaattaccgcagtggtagtaaagcactcgacattattgatgaacaa
tctgccaagatatttgaaatgctggttgagcaagaaaacacactcagctttttaccattg
ccagaagcttatcaacaaaaaattgccgacagcgaagatgaaggttcattctttcagacc
gacgatgaatcggaattgccacctcttgatttatacctcgaacagaaaaagggagcggcc
cgcttcaccgacaaatacctacaaaccggattagtaccagccaaacttgataaagcactg
ctgaaactagaaaccgaagcccatactatgcttcaagagcaaggtgtcgaggttctatat
ttagcacttggttttttacagtggaatgaaccaacaaactcatctgtctcaaggtatgcg
cctttaattttaatcccagttcaactaatgcgatcatctgccagagatagctttaaattg
cgctacacaggtgaagatctgggttcaaacctgaccttagctgcaaaactaaggactgag
tttaagttaatgcttcccgcttattctgatgagatggtaatcacagattattatcaggcg
gtatcagatgcgattacagcgcaaccttcatggcgagtgcatcaggataaaattggttta
ggactgttctcttttggcaagtttcaaatgtacatggacttggaccctactggctggccg
gaaggaaaaaaaccatcacagttaccgttgattggccgcttatttcgtgatggctttccc
cacgatgcagagatcaatcctgcagatctgaatcatccagaaaaactccacttggtaaaa
gacgccgattccagccagattgaagcaatcttggcgatgaagtctggcgcggacctgatc
attcaagggccgccaggtacaggtaaatcccaaactatcaccaacattattgccgaagcg
gttgcgctgggtaaaaaggtgctgtttgttgcacaaaaaatggcagcacttgaggtggtg
aaaaaacgccttgatgaaactcatatgggctatgccgtactcgaactacatagtcacaaa
agtaccaagaaatctgtgcttggttctattgctgaatcacttgagcaaggtcggccacaa
accgcaaaccgagagcaagagttttcagatttagcggaatcaaaagcctcgctggatgct
tatgtgcatgccatccgagcctctattctgcgtagcggtatcaattacattgaagcgtta
ggctcattgctgcaattgaagacaaaggatcccgacaactccttaccagccctccccttt
agctacttcgaacaatggacagctgaggaatacagtaatgccaggaaactggttacagaa
ttagtacagcaactagcacgcattggcatacctgcagcgcatccattttcgatgtctggt
cgcactgacttttcaccttcgttgcagcaggccttaacctctaccttggcagaaatatgc
ccgttacttagccaacttgatgtccaagcccaaactgtcagtgtttttcttaagctagag
aaaccacaaagcttgcaacaagtcacgccgctgatttcaactacgagctggctatccgaa
ttaccggatcttaaaagcgttaaagtaaataaccccatatgggctttagaaaaaaagtgg
atcgataacggcctgacctgcctagctaatttcttatcactcaaagccagctgcgaacag
cactttatcacgcaggcgctggatgcagatttgctgagtatccgccaaggcttgattggc
aaaacagataaatggtggcgtttcctgtcgtccagctatcgccaagccaaagcacagcta
gcagggctttggcttggcgctctgcccgcttcgtctactgactggcttactgcattagat
actgccttaacttaccaaagcgcgaaaaaagagttaactagctaccacactctgttatct
gaagcttttggcgcgcagtggcaaggcgaattttcggagcacagtgaattaacgcaaata
aacagctggataaacaccttttacacaaaggtaaaccgccttgaattgtcgcagtcattg
gctgaactgattgatacgggccttgataaaaagctgctgcgtgaccatacaaactcactg
acagcgctctgcacaggcatatctgtacaattgaaaacactgaaagagttgatacaaata
cccaacagcaatccaaaccatgacttagcagcaatgcaatttacgcaactaaatgtctgg
ttagaaggctggaaaaactctgccctactttacgattttgcacgctacaaccagattatt
aaggcgtttgagccttataacatcaaggacttcactaaatatgcttactcatggcatgca
gccccagacttgctaatgacggtattcgaacttagctattattctggtctggttaactat
gcctatgacagctcagaagcaatacggcactttgaccgcaataaacatgaacaaagccta
cacgactttaaacgtattgatggtaacagtttgtttttcgctcaagaatttttagtaaac
agcctgtacgagcgcttgccaaagaaaacagctaaaggtgaaatggaattagtactgcgt
gagttaggtaagaaaaaacgccatattcctattaggaaattgctggctgaagcaggtaac
gtgatccagcaagtaaaacctatttttatgatgagccctatgtccatcgccacctacctg
aaacaaggtgcgttagattttgacctggtgatttttgacgaagcaagtcaaattccagca
cccgatgccttaggcgcaatgctgcgcgggcggcaagtgattgtggtaggtgacagtaag
caaatgccaccaagcaacctatttggtaaagctgttgaactggaagaggaagaactggaa
aacagcgccaccgcagaaatggaaagtattctggcattaatggaagcccgtggtgcggca
agtaaaatgctgcgctggcactaccgttctcgccacgattcactgatcgcagtgtccaac
gaccagttttataaaaacaagttagtggcctttccaagcccaggctttcaccccgatgca
acaggactgaagtttcattatttacctgaaacgcattacgacaaaggcggttcacgcata
aatccaggcgaagtaaaagctgtagtagccgcagtactgaatcacgctttaactaaacct
cacttgtccttgggtgtggtggcttttagcctttcgcaacgtgatgccattttgcttgag
ttggaaaaagagcgccgcttacagcctgaaaccgacgaattctttgcacgccatgcaggc
ggcgacgagttttttgtaaagaacttggagaacgtgcaaggcgacgagcgcgacgttatt
ttgatcagtatttgttatggcaaaaccagcacaggccagctgagccagaattttggtttg
ttgaataagccaggtggtgaacggcgcttaaacgtgttgatctcacgcgcgcggctggcg
atggaagtctttgccaactttagaggtgatgaactaaaagtagaagcagatagtcctttt
ggcgtacgttcgctacaaatctttttgcaatttgctgaatcaggccagttaaacaaagcc
tatgaaaaagagcaggagcaaaactttgcttttggtgcactgctacatcaggcgatccag
cgtttggggtatcaggtagcaactcgggtcggcagtcaggggtattacatcgacttagcc
atcaagcatcctgaagaccccagtaaatttgtattggctctggaatatgacggcgcaggt
tattatggggccacttcggcccgtgaccgtgaacgattgcggcaaagtgtgctggaaggt
cttggctggagctttgaacgcatttggtccaccgactggtttcgcgatccagaggcagag
ttacatcgcttgaaagtattgatagataaagccataacccaacacaacgaactgatggta
gcaatggccgcacaagccactaacaccagacaagtgaaacacaaagttgcgatgccggag
gccgttgctgcgccaataatgcgggttgaagaagaacaaccagagtttgaagcctgcact
acaccctataaaaaagccgatgtgtctaagctaaatattccccatgtggatgatttcagc
gccattcctttaagtatgttggtgcatgcggtggagcgtattgttgaaaccgaatacccc
atattcgccagtttagtggccacccgtttagccaacgctgcaggactgacaagagttggt
gccaaaattaaacgcactgtagatcaagccatagaaagcgccgttgccaaagggttaatt
aagttagataaagacgaagtgttatggccacaaggccgcagcacagtcaaattaagaaac
tggaacagcgccgacacagccacccgcaagctggaaaacgtctgtgatgccgagctaacc
aacgccttattactgacagtgcaagacgcccatgccattagcgtgacggatgccgcttct
gcagctctgggcctattgggctttcaacgggcaacagctcaggcagctgagcgaatgagc
aagttggcacagattcagtgtgataaaaatgtgctggtttgtgagaatgagcggttgaaa
atatcaatagccaagccttcgttgccctga
DBGET
integrated database retrieval system
