Shewanella sp. W3-18-1: Sputw3181_1358
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Entry
Sputw3181_1358 CDS
T00453
Name
(GenBank) Pyrrolo-quinoline quinone
KO
K17713
outer membrane protein assembly factor BamB
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_1358
Transporters [BR:
shw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sputw3181_1358
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GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_WDR36-Utp21_1st
DUF6906
Beta-prop_LRRK2
Motif
Other DBs
NCBI-ProteinID:
ABM24201
LinkDB
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Position
1537646..1538833
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AA seq
395 aa
AA seq
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MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGSGVGDYYS
RLMPAVRYGKIFAADRYGKVIAFDEATGDRVWTKDFSEEFRDNALAKNKGARIAAGVTAA
RNKVFVGGESGLLAALNIEDGQVLWHIVAGGELLSKPTVADDVVVVSTSSGSLEAFNVDT
GDKLWVYKMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIVWTRKYSSFNELASAGLSLFL
VDDHSRIYSVDRRNGLELWSNSELTNRTLTSPAVYKDYLVVGDFEGYLHFIDRSTGTIVG
RIQVDSSGLYSQPLVVDDKIYVQGRSGKLAVVTLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaaacctgttagccgctggattgagtctagcgatgttatccgcc
tgttcatcgagtgatgttgaagaagagccggtaagtgagttaactgcaattcaggcaacg
gtgttccctgaagtaagttggagcgcctctgttggtagtggtgtgggagattattattct
cgccttatgccggcagttcgttacggtaaaatttttgccgcagaccgttacggtaaagtc
attgcgtttgatgaagctacgggtgaccgtgtttggactaaagattttagcgaagagttt
cgtgataacgccttagctaaaaataaaggtgctcgcattgccgcaggtgtcaccgctgcc
cgtaataaagtctttgtgggtggtgagagtgggctgcttgcagcactgaatatcgaagat
ggccaagtattgtggcatatcgttgcgggtggtgagcttttatcaaagccaacggttgct
gatgatgtggttgtggtgagtacgagctccggttcactcgaggcttttaacgtcgatact
ggcgataagctgtgggtgtacaagatgcagttgccgaacctgacgttacgtggcacaggc
tctgccgcctatgaagcgggtggtttctttattggtactgccgatggcaaagtggctgtt
gtggtgaaaaacaatggtcaagccgcgtgggaacaagcgatttataatccaacgggcggt
aacgagtttacgcgtatggccgacgtggatatgacaccgcttattcttggtgataattta
tatgcggttagctataacggtaacttagtgtcgatggaattgcgtacgggtcgcatagta
tggacacgtaagtattcaagctttaacgaattagcatcagcaggattaagtttgttttta
gttgacgatcatagtcgtatctactcagttgatagacgaaatggtttagagctatggagc
aactctgagttaacaaatcgaacattaacctcgcctgcagtttataaagattatttagtt
gtcggtgatttcgaaggttatctacactttattgatcgcagtacagggacgattgtcggt
cgtattcaagtcgatagctctggattatacagtcagccattagtggtggatgataaaatc
tatgttcaaggtcgcagcggaaagctggctgttgtaacacttccgtag
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