Shewanella sp. W3-18-1: Sputw3181_1425
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Entry
Sputw3181_1425 CDS
T00453
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw02020
Two-component system
shw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sputw3181_1425
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sputw3181_1425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shw02022
]
Sputw3181_1425
02035 Bacterial motility proteins [BR:
shw02035
]
Sputw3181_1425
Two-component system [BR:
shw02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Sputw3181_1425
Bacterial motility proteins [BR:
shw02035
]
Flagellar system
Flagellar assembly proteins
Others
Sputw3181_1425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
Mg_chelatase
HTH_30
AAA_19
AAA_7
AAA
HTH_24
AAA_3
MerR
AAA_14
nSTAND3
MCM
NB-ARC
HTH_50
HTH_11
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABM24268
UniProt:
A0A6N3J3B3
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All DBs
Position
1612136..1613476
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AA seq
446 aa
AA seq
DB search
MSEAKLLLVEDDASLREALLDTLLLAQYECIDVACGEDAILALKQHQFDLVISDVQMEGI
GGLGLLNYLQQHHPKLPVLLMTAYATIGSAVSAIKLGAVDYLAKPFAPEVLLNQVSRYLP
LKTNVDKPIVADEKSLALLSLAQRVAASDASVMIMGPSGSGKEVLARYIHQHSSRAEQAF
VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL
LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAVVAAGGFREDLYYRINVFPLTWPALN
QRPADILPLARHLLAKHAKALNIGAIPELDEQACRRLLSHRWPGNVRELDNIVQRALILR
TGPVITANDIIIDVQGALISDEFEVSASEPEGLGEELKAQEHVIILETLAQCQGSRKLVA
EKLGISARTLRYKMARMRDMGIQLPS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccaagttactcttagttgaagacgacgcctcattaagggaagccttactc
gatactttattacttgcacagtatgaatgtattgatgtggcttgtggtgaagatgccatt
cttgcattaaaacagcatcaatttgatctcgtgataagtgatgtgcagatggagggtatt
ggcggtttaggtttgctaaattacctgcagcaacatcatcctaaattgcccgtattgctg
atgacggcctatgccacgattggcagtgccgttagcgcgattaaactaggtgcagttgac
tatttagccaaaccctttgcgccagaagtattgttaaatcaagtttctcgctatttacct
ttaaaaaccaacgttgataagcccattgttgctgatgagaagagtcttgcattgttatca
ctagcacaacgcgttgcagcatccgatgcttctgtgatgatcatgggacccagtggttcg
ggtaaagaagtactcgctcgttatattcatcagcatagcagccgtgccgaacaagccttt
gttgccatcaactgtgccgctattcctgaaaatatgcttgaagcaactctcttcggatat
gaaaagggcgcatttactggtgcttaccaagcatgccctggtaagtttgaacaagcgcaa
ggtgggactttgctgctcgatgaaatatcagaaatggatttaggtttacaggcaaaatta
ttacgggtgttacaagagcgtgaagttgaacgattaggtggtcgtaagacgattaagctc
gatgttcgtgtattggcgacctcaaatcgtgatttaaaagcggtagtagccgcaggtgga
tttagggaagatctttattaccgtatcaatgtatttccattaacatggccggcgctcaat
caaaggcctgcggatatcttaccgcttgctcgccatttattggctaagcatgcaaaagct
ctcaatatcggtgctatacctgaattagatgaacaagcatgccggcgtttacttagccat
cgctggccaggaaacgttcgagagctagataatattgtccaaagagccttgatcttacgg
acaggtccagtgattaccgccaatgatattattattgatgtgcagggtgcgttgataagt
gatgaatttgaagtgtcagcgtctgagccagaagggttaggtgaagaacttaaagcacag
gaacatgtgattattttagaaaccttagcccagtgtcagggtagccgaaaacttgtggct
gaaaaactggggatcagtgctcgaactttacgatataaaatggctcgtatgcgggatatg
gggattcaattacccagttaa
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