Shewanella sp. W3-18-1: Sputw3181_1496
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Entry
Sputw3181_1496 CDS
T00453
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shw03036
]
Sputw3181_1496
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_1496
Chromosome and associated proteins [BR:
shw03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Sputw3181_1496
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sputw3181_1496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
PFam54_60
SKA2
Bacillus_HBL
YkyA
DUF948
Allexi_40kDa
Motif
Other DBs
NCBI-ProteinID:
ABM24334
UniProt:
A0A6N3J3D9
LinkDB
All DBs
Position
complement(1690078..1690470)
Genome browser
AA seq
130 aa
AA seq
DB search
MSDFLEILTHGRRFKAAVKDLSIEELRDLASKLDKILSERESMAEEEQQMIAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKAPSKKRPPRPAKYQIEVDGEMIQWTGQGRMPTVFKNEVN
KGRSMDDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttttagaaatattaactcacggacgtcgttttaaagctgcagtaaaagat
ctcagcattgaagaactacgagatttagcctcaaagctagataaaattttatctgagcgt
gaatcaatggctgaagaagaacagcaaatgattgctgctcgtaatgctaagattgaagaa
atccgtcaacaaatggaagcggtaggcttatccattgatgatctcggcggtgtagcagtt
aaagctccaagcaaaaagcgtccacctcgcccagcgaaatatcaaattgaagttgacggt
gaaatgatccagtggacaggccaaggccgcatgccaaccgtatttaagaacgaagtcaac
aaaggccgttctatggatgatttcttaatctaa
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