Shewanella sp. W3-18-1: Sputw3181_1511
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Entry
Sputw3181_1511 CDS
T00453
Name
(GenBank) DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sputw3181_1511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shw03000
]
Sputw3181_1511
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_1511
Enzymes [BR:
shw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Sputw3181_1511
Transcription factors [BR:
shw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sputw3181_1511
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sputw3181_1511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ABM24349
UniProt:
A0A6N3J3N4
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All DBs
Position
1717487..1719178
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AA seq
563 aa
AA seq
DB search
MSADRASESANKRDEIDSMHSLEFSAGQLSASICREARMSRDPRFDGKFFVGVLTTGIYC
RTVCPAVAPKEQNVRYFDSAIKAAQAGLRPCLRCRPDSAPGSNPWKGTGTTLARAISLIE
AGALAGKSSGEPASTVTQLADRLGISSRYLNKLFTEGFGTSPKQYALYRQLLFAKQLLHQ
TQLPITQVAMAAGFNSIRRFNEAFKQTLQLTPTQLRKSALTKAAKESMSEPLTGLGEIDT
MGEFVPHYGLTLYQYYRPPLDWTSQLAFYRLRAVTGMEWFTPQMSHPQASDVVGDEASVV
DEAKAGDNGLEYGRCFALGKMRGTVHIIHEPKLNRFKLAIMLTEDSLVDELQLLVTEVRR
ILDLDADMLQIEQGLSALPSLGLTPFSGLRIPGAGSLFEAACRAILGQQVTVVQATKLLN
QLVEAYGERFSLNGCEYRLFPTPEAIREASLTELKMPGARKLALNALAAFICDHPEASVD
DWLSVKGIGPWTIAYAKLRGLGDPNVFLHTDLIVKKHLLALYGKTHRLDEAAAGAVNYPQ
LCQQLSQEIAPWGSYLTFQLWHQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatagagcctctgagagtgcaaataagcgtgatgaaatagactcaatgcat
tcgctggagttcagtgcagggcaactttctgcgtccatttgccgtgaagcgaggatgagc
cgcgatccgcgttttgatggtaagttttttgtgggcgtattaacgacgggcatttattgc
cgaactgtgtgtcctgctgtggcaccaaaagagcaaaatgtgcgttattttgattcggcc
attaaagccgcgcaggcgggattacgcccatgtttacgttgtcggcccgacagtgcgccg
ggatcgaatccttggaaggggactggcacaacgttagcgagggccattagtttaatcgaa
gcgggcgccttagcgggaaagtcatcgggagagccagcctcgacagtaacacaattggct
gaccgattagggatcagcagtcgttatctcaataagctctttaccgaaggctttggcact
tcgccaaaacaatatgccttatatcggcagttactgtttgctaaacaattattgcaccaa
acccaattacctatcactcaagtcgcgatggcggcgggtttcaacagtattcgccgtttc
aatgaggcgtttaagcaaaccttgcaattgacgccgacccagttaagaaagagtgcatta
accaaagcggcaaaggagtccatgagtgagccactaacaggattaggtgagattgataca
atgggtgaatttgtgccgcactatggattaaccttgtatcagtattatcggcctccattg
gattggacatcacagctggcgttttatcgattacgtgcagtaacagggatggaatggttc
acaccgcagatgagtcatccacaagcgagcgatgtcgttggcgatgaggcgtccgtggta
gatgaggccaaagctggcgataatgggctcgaatatggtcgctgttttgccctaggtaag
atgcgcggcacagtgcacattatccatgagcctaagctaaatcgcttcaaactcgcgata
atgttgaccgaagattcccttgtcgatgagctgcaattgctggtcactgaagtgcgacgc
attttagatctcgatgcggatatgctgcagattgaacaaggcttaagtgcgctaccaagt
ttaggattaacaccgttttcgggattacgcattcccggtgcaggctccttatttgaggcg
gcctgccgtgcgattttaggccaacaagtgacggtagtgcaggcgactaagctacttaat
caattggttgaagcctatggcgagcgctttagtctcaatggttgcgagtatcgtttattt
cctacacccgaggccattcgtgaggcgagtctaacagagctaaaaatgcccggcgctcgt
aaattagccctcaatgcgctcgcggcgtttatctgcgatcatcctgaggcgagtgtcgat
gattggctcagcgttaagggcataggtccttggacaatcgcgtatgctaagctccgcggt
ttgggcgatcccaatgtgtttttgcataccgatttgattgttaaaaagcatttgctggcc
ttgtatggcaagacccataggctggatgaagccgctgcgggtgcagtcaactacccgcag
ctgtgccagcaattgagtcaagaaatcgcgccttggggcagttatttaacctttcagctt
tggcatcaatag
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