Shewanella sp. W3-18-1: Sputw3181_1543
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Entry
Sputw3181_1543 CDS
T00453
Name
(GenBank) TPR repeat-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_1543
Transporters [BR:
shw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sputw3181_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_16
TPR_11
TPR_14
TPR_8
TPR_19
TPR_12
TPR_6
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
ABM24381
LinkDB
All DBs
Position
complement(1752284..1754275)
Genome browser
AA seq
663 aa
AA seq
DB search
MSLHFIRPEWLFALLPLALVLLILWRHHQNHSAWNRYIAPHLAKILVTQGSNKSRRPLHL
LAFTWLIATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD
LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLTAGLIQAKM
LLAQGGHIRGDIILMTDGITPHQFNEANSALSGTQYRLAIIAFGTSQGAPIRLPDGQLQR
DSSNEVVVASTDFALLQKLATNYKGTLIQNRTDGNDLLQLQQWLSETGDAKATDLDGETW
QDLGPYLALLLLLPALFSFRQGIVASIGFVTLTGGLLLAAVPQPAQASLWNDLWQTADQQ
AMQAYQSQDYSNAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG
KPDKAKERYQAALEQQPNFPDAKANLALAEKLLEEQQQQSKNDQQNKNQGQQGDQQNSSD
NGEQQSNEQQSGSQASQEQQQPDQDKSQQNKSEQAEQGSKEQQDNANADQNLEQQKEDEQ
PPEQEKLNGHNQSDSDETQENAPVENEAKMQAQAKADTEQSAEQEKQNLGAKEAPEKNTP
DKQDATITESLEPPMNSEPLPPEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQILRDN
EQW
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcattttattcgtcccgaatggctattcgcactattaccactagccttagtg
ttattgattttatggcgacatcaccaaaaccacagtgcttggaaccgttatattgcaccg
cacttagccaagatattggtcacccaaggcagtaataaatcccgccgtccgttgcattta
ttagccttcacttggctgattgcaacttttgcactcgccgggcctgctgtgaataaacag
tccttacctgtgtttgccgcagagcaaggtcgcgtgttagtcatggacatgtctgtgtcg
atgttcgccaccgatcttgcgccgaatcgattaacccaagccaaatttagggcaaccgat
ctgctgcgtaatcttaaagaaggtgaaacaggtttagtcgcctttgccggcgatgccttt
actatcagtcctttaacccgtgatactggcacactactcaatttactgccgaccttaagt
cctgagatcatgccagtgcgtggttcaaacttaacggcagggctaatccaagccaaaatg
ctactggcccaaggtggtcatatccgtggtgatattatcctaatgacagatggtattacc
ccgcaccaatttaatgaggccaactcagcattaagcggcacgcaatatcgcctcgcgatt
atcgcttttggaacgagccaaggtgcgccaatccggctacctgatggacaattacagcgc
gatagcagtaatgaagtcgtggtagccagcactgactttgccttattacaaaaactggca
acgaactataaaggcacattaatccaaaatcgcaccgatggtaacgatttactccaatta
cagcagtggttgagtgaaacgggtgatgctaaagccacggatttagatggcgaaacttgg
caggatctcggtccttacctcgcattattattactgctacccgcccttttcagctttaga
caaggaatcgtagccagtattgggttcgtcactcttacaggcggcttactgctcgcggca
gtgcctcagccagcccaagccagtctgtggaatgatttatggcaaaccgcagatcaacaa
gcgatgcaggcctatcaatcccaagattattccaacgctgcgaaacaatttgagtcgccc
caatggcgtggcagcgcacaatataaagcgggggattatgagcaagcgttaaaaaccttc
gagcaagatagctcagcccaaggcctatacaatcaaggtaatgcattgatgcaactcggt
aaacccgataaagctaaggaacgctatcaagcggcgcttgaacaacaacccaactttccc
gatgcaaaggctaatcttgcccttgctgaaaaactattagaagagcagcaacagcaaagt
aaaaatgatcaacagaataaaaaccaaggtcaacaaggggatcaacaaaactcatcagac
aatggcgagcaacaatcgaatgagcaacaatcaggcagtcaagcatcacaggagcaacag
cagcctgaccaagataaatctcagcaaaataaatcagagcaagcagaacaaggatctaaa
gagcaacaggataatgccaacgcggatcaaaatcttgagcagcaaaaagaggatgaacaa
ccgccagaacaagagaagctgaatggtcataatcagagtgatagcgatgaaacacaagaa
aatgcgcctgtagagaatgaagcaaaaatgcaagcacaggcgaaagccgatacagagcaa
tctgctgagcaagaaaaacaaaaccttggtgccaaggaagctcctgagaaaaatacacca
gataaacaagacgctacaataactgaatcactcgagccgcccatgaatagcgaaccactg
ccaccagaaatgcagcgagccctacggggcgtgagtgaagatccacaagtgttattgcgt
aataaaatgcaattggaataccaaaaacgccgtcaaaatggccaaatattaagggataac
gaacagtggtaa
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