Shewanella sp. W3-18-1: Sputw3181_1562
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Entry
Sputw3181_1562 CDS
T00453
Name
(GenBank) FAD dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shw03016
]
Sputw3181_1562
Enzymes [BR:
shw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Sputw3181_1562
Transfer RNA biogenesis [BR:
shw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sputw3181_1562
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_9
FAD_binding_2
Methyltransf_30
Pyr_redox_2
PAS_PdeA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ABM24400
UniProt:
A1RIA5
LinkDB
All DBs
Position
complement(1777855..1779897)
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AA seq
680 aa
AA seq
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MTAEPNKPCQIKRDYPQLINLYPATAHNDAHYLSKLSIYQQRVFEAHSQQKLLVLGQMGL
GNGLELLSWWRTQTNPNQRLLLKVFEPHPINAYELKLLWDQSASLAKVPELELLAQRLLH
TEPTAIIGCQRLIFDDGRTTIDLHFGDIQSQLSSLIHSPLHPVQHWLVLPHLQNGLHQQI
HWQMAKLSDDSATVATIGLNESSGLSETTVNRFQACGFEVRDFTCAEIQTNPQPDAILLH
ERHVLRRQDAKAYAFNPMAAILSSDAPSSIAIIGGGLASAHLALSLAERGQSTQIFCKDA
KLGQGASGNRQGAIYPLLTPENDELSRFFQQAFLFSRRRVQALTSAPAPNQTPISHNFCG
VLQTAHDERSQLRLDKIIQSQNWPSEIAYRVDAQQANCLANINIDKSGFFYPLAGWVCPY
EYAEAALQKAQQLTEVKLHLETEILEIEHQSEGWYLITAKHRFGPFAQVVLANGAALTQF
DASNKLQISPFRGQVSHVPAQFQLSQLATVLCANGYLTPSHEGLHCLGASYVKEPKHLDF
CPQEQQENLAKMHESYPDQGWLDDIDMSGNNARVGVRMVTRDHFPMMGCAPDVPKIIKDY
AQHQLTKESRHYWQTTPAPVHEGLYILGGLGSRGLSSGPLAAECLAAQLCSEPIPLDKAT
LCKLNPNRMWLRKLLKGKSL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcagagcccaataaaccttgccaaattaagcgcgattacccgcaattaatcaac
ctttatcccgcaaccgctcacaatgatgcacactatctcagcaagttgagcatttatcag
cagcgggtatttgaggctcattcacagcaaaaactcttagtattagggcaaatgggttta
ggtaacgggcttgaactcttatcttggtggcggactcagacgaaccctaaccaacgatta
ctccttaaagtcttcgaaccccatccgattaatgcgtacgaacttaaattactttgggat
caatccgccagtttagccaaagtgcctgaacttgagctacttgcccaacgcttacttcat
acagagccgacggctattataggttgtcagagattaatttttgatgacggtcgtaccaca
atcgacctgcactttggtgatattcaatcccaactcagttcactcatccattctccgctg
caccccgttcagcactggctggtattgccccatctacaaaatgggttacatcagcagatc
cattggcagatggcaaaactcagtgacgatagcgccactgttgcaacgattggattaaac
gaatcaagcggattaagcgaaacaacagtcaatcgtttccaagcctgtggctttgaggtg
agggattttacctgcgctgaaatacagacaaaccctcagcctgatgccattttgttacac
gagcgccacgtcttacgccggcaagacgctaaagcctatgcctttaatcctatggctgca
atcttatcctcggacgcacccagctcgattgccatcataggcggcgggttagcctcggcg
catttggcgctgtctttggcggagcgtggccaaagcacgcagatcttttgtaaagatgcc
aagcttggccaaggcgcttcgggcaaccgccaaggggcgatttatccgctgctgacaccg
gaaaatgatgaattaagccgcttcttccagcaggcattcttatttagccgccgtcgagta
caggcgctgacatctgcccccgccccaaatcaaacgccgatttcccataatttttgcggg
gtattgcaaaccgcccacgatgaacgcagccaattacgactcgataaaattattcaaagc
cagaactggccaagtgaaatagcctatcgagtcgatgcccagcaagccaattgtcttgcg
aacattaatatcgacaaatcaggctttttctatccgctggctggctgggtttgtccctac
gaatatgccgaagccgcactacaaaaagcgcagcagcttaccgaggtcaaactccatttg
gagactgagatccttgaaattgagcatcaaagtgaaggttggtatttaatcaccgctaag
catcgctttggcccctttgcgcaagttgtgctcgccaatggcgcagcactcacgcaattt
gatgccagcaacaaattacaaattagcccttttcgcggccaagtcagccatgtgccagct
caatttcaattgagtcagctcgcgactgtgctgtgcgccaacggttatttaaccccgagt
cacgaaggactccactgccttggcgcgagctacgttaaagaacctaagcatttagatttt
tgcccgcaggagcagcaagaaaatctcgccaaaatgcatgaaagttatcctgaccaaggc
tggcttgatgatatcgacatgagtggcaacaatgctcgcgttggcgtgcgtatggtgacg
cgggatcatttccctatgatgggctgcgcgcccgatgtgccaaaaattattaaagattat
gcgcaacatcaactcacgaaagaaagtcgccactactggcaaaccacgccagcgccggtg
cacgaagggttgtatattctcggcgggttaggctcacggggactcagttctgggccattg
gccgccgaatgtctcgcggcgcagctttgcagcgagccaataccactcgataaagcaacc
ctgtgtaaactcaaccctaatcgtatgtggctgcgaaagttactcaagggaaaatccctc
tag
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