Shewanella sp. W3-18-1: Sputw3181_1610
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Entry
Sputw3181_1610 CDS
T00453
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shw03009
]
Sputw3181_1610
Enzymes [BR:
shw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Sputw3181_1610
Ribosome biogenesis [BR:
shw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sputw3181_1610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HEAT_EZ
NfeD
Motif
Other DBs
NCBI-ProteinID:
ABM24447
UniProt:
A0A6N3J3S7
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All DBs
Position
1834786..1835661
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AA seq
291 aa
AA seq
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MSEKLQKVLARAGHGSRREMEAWIAAGRVSIDGEIASLGDRIEADAKVRIDGRAISLKSA
EDVICRVLAYHKPEGEICSRKDPEGRPTVFDRLPKVRDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSNEVDREYAVRTFGEIPEATVQRLRTGVMLEDGPAQFDSIKPAGGEGMNQ
WWHVCLREGRNREVRRLWESQEVQVSRLIRIRYGMVELPKSLPRGGWVELPVEQVNYLRQ
LAGLEPETRTMLAADKHSVARAQVKSAKIRRAVRKHKVTGAGKAKPTRQRS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggccgagttagtattgatggtgaaattgctagccttggggat
cgtattgaagccgatgctaaagtgcgtatcgatggcagagccatttcgttaaagtctgcc
gaagacgtgatttgccgtgtactggcatatcataaacccgaaggcgaaatttgcagtcgt
aaagatcctgaaggccgtccaacggtattcgatcgcttacctaaagtgcgtgattcacgc
tgggtagcggtaggtcgtttagacatcaatacctcaggtttattgttgtttacctcagat
ggtgagttagcaaaccgcttaatgcatccatcgaacgaagttgaccgcgaatacgcagtg
cgtaccttcggtgaaatccctgaggcgacagtgcaacgtttgcgtacaggtgtgatgtta
gaggacggcccagcacagtttgatagcatcaagccagcgggcggcgaaggcatgaaccag
tggtggcatgtgtgtttacgcgaaggtcgtaaccgtgaagtacgccgtctgtgggaatcc
caagaagtgcaggtgagccgtttgatccgtattcgttatggtatggtcgaattgccaaaa
tcactgccccgcggtggttgggttgaattgcccgttgaacaagttaattatttgcgtcaa
ttagcgggtcttgagcctgaaacgcgcactatgcttgctgctgataaacacagtgtggcc
cgtgctcaggttaaaagtgccaaaattcgccgcgcggtgcgtaagcataaagtcacaggg
gctggaaaagctaaaccaacgcgccagcgcagttaa
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