Shewanella sp. W3-18-1: Sputw3181_1778
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Entry
Sputw3181_1778 CDS
T00453
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shw03009
]
Sputw3181_1778
Enzymes [BR:
shw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Sputw3181_1778
Ribosome biogenesis [BR:
shw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sputw3181_1778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ABM24615
UniProt:
A0A6N3J432
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All DBs
Position
complement(2048312..2049124)
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AA seq
270 aa
AA seq
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MSQPPVSKSMNKNKFPPKGANSSTSSPAKSTIKPAKHASRGPVNRATAVDSKVAPARNAN
GSLKKEPFKNPNRRAIAAAKPVQSQTLAPIIVLFNKPFDVLCQFTDEQGRKTLKDYIPIA
DVYAAGRLDRDSEGLLLLTNDGQLQARLTEPKKKTFKTYWVQVEGVPTEDALTKLRQGVE
LNDGITLPAKVKIMDSPDIWPRNPPVRERKNIPTTWLEIQIHEGRNRQVRRMTAHIGFPT
LRLIRYKIGQWSLDNLPSGEHKCIRLGDEV
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcaacctcctgttagcaaaagtatgaacaaaaacaagtttccacctaaaggtgcc
aattccagtactagttccccagccaagagcacgattaaacccgcgaagcacgccagcaga
ggcccagtcaaccgcgctaccgccgtagatagcaaagtggcgccagcacgtaatgccaat
ggcagtttaaagaaagaaccctttaaaaatcctaatcgacgcgcaattgcggcagcaaaa
ccggtgcagagccaaacgctcgcaccgattattgtactgtttaataagccttttgatgta
ctttgccagtttaccgatgaacaaggtcgcaaaaccctaaaagactatatcccgattgct
gatgtgtatgccgctggccgcttagacagagacagtgagggcttattgctgctaactaat
gacggtcaattacaggcaaggctgacagagccgaaaaagaaaacctttaaaacctattgg
gtgcaagtagaaggcgttccgacagaagatgccctgacaaaactgcgccaaggtgttgaa
ttaaatgatggtataacgctaccagctaaagtcaaaattatggattcacccgatatttgg
ccacgtaatccaccagtaagagagcgcaaaaatatcccaacaacttggctagaaatccaa
attcatgaaggccgtaaccgccaagtcagacgcatgacagcgcatatcggttttccgacc
ttaagattaatccgttataaaataggccaatggagtctagataatttgccatcgggtgag
cacaaatgcattcgtctcggtgatgaagtctaa
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