Shewanella sp. W3-18-1: Sputw3181_1779
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Entry
Sputw3181_1779 CDS
T00453
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00020
Citrate cycle (TCA cycle)
shw00480
Glutathione metabolism
shw00720
Other carbon fixation pathways
shw01100
Metabolic pathways
shw01110
Biosynthesis of secondary metabolites
shw01120
Microbial metabolism in diverse environments
shw01200
Carbon metabolism
shw01210
2-Oxocarboxylic acid metabolism
shw01230
Biosynthesis of amino acids
shw04146
Peroxisome
Module
shw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shw_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sputw3181_1779
09102 Energy metabolism
00720 Other carbon fixation pathways
Sputw3181_1779
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Sputw3181_1779
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sputw3181_1779
Enzymes [BR:
shw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Sputw3181_1779
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Gene cluster
GFIT
Motif
Pfam:
IDH
HTH_39
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
ABM24616
UniProt:
A0A6N3J482
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All DBs
Position
2049441..2051666
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AA seq
741 aa
AA seq
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MKDNSSTIIYTETDEAPALATLSLLPIIRTFTDAAGVAVETRDISLSGRIIASFPEQLTE
AQKIGDHLTELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDA
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWAKDSKSHVAHMTD
GDFYGSEQSVTLSDAGSVNIVLTQKDGQEVVLKSGLKLLAGEIIDAAVLSKKALVSFYER
EIENAKAEDVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHAALFAELGVDVNNGFG
DVYAKIATLPADSRAEVEADIAAVYAARPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLHDTKAMIPDRCYAGIYQETIAFCKEHGAFDPKTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVVDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDSKRAHDAQIIAKVQQYLPEHDTDGLEISIMSPEEATRFSLARIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTGDEQLQAHFIPLAHALAANEQVIVAELANAQGASVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcatcaacaattatttacactgaaacagacgaagcgccagcactggcc
accctctcactcttacctattatcagaacgtttaccgacgccgcgggcgttgcggttgaa
acccgtgatatctcgttatcgggccgtattattgccagtttccctgagcaactgaccgaa
gcacaaaagattggcgaccatctgacagagcttggcgagttagctaatcagccagaagcg
aacatcatcaagttaccgaatatcagtgcttcgatcccacaattaaaagcctgtatcctt
gaactgcagcaaaaaggttacgacattcctaattatccggatgagccaaaaaccgacgct
gaaaagtcaattaaagcccgttacgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaattcagatcgccgcgcgccattatcggtgaaaaactttgccaagaaaaac
ccgcattccatggggaaatgggctaaggattctaagtcacacgttgcccacatgactgac
ggtgatttctacggcagcgagcagtctgtcactttatctgatgcgggcagtgtgaatatc
gtgctgacgcaaaaagatggtcaagaagtggtgctcaagtcgggtcttaagctgctggct
ggcgaaattatcgatgctgcggtattgagtaaaaaagccttagtgagcttctatgagcgt
gaaatcgaaaacgccaaagctgaagatgtgctgttatcgctgcatctcaaagccactatg
atgaaagtgtctgatcctattatgtttggtcacgcagtgaaggtattctttaagccagta
tttgacaaacatgcggcgcttttcgctgaattaggcgtagatgttaacaacggttttggt
gatgtttatgccaagatcgcgacattacctgccgacagccgcgccgaagtcgaagccgat
atcgccgccgtttacgctgcgcgtcccgcattggccatggttgattctgacaaaggtatc
accaacttacacgtgccaagcgacatcattatcgatgcgtctatgcccgctgcgattcgt
tcatctggccaaatgtggggaccagacggtcaactgcatgacactaaagccatgatcccc
gatcgttgctatgcgggtatttaccaagaaacgattgctttctgtaaagagcacggcgct
ttcgatcctaaaaccatgggcagtgtacccaacgtcggcttgatggcgcaaaaagcggaa
gagtacggcagccacgataagacctttgaaattcctgctgacggtgtggtcaacgttgtt
gatgccagcggtaaggtattgatgagccataacgtggaagcgggcgatatctggagaatg
tgtcaagttaaagacgcacctatccgtgattgggtcaaactggccgtgcgccgtgcccgt
ttaagcaatactccagcggtattttggttagatagcaaacgtgcccacgatgcacaaatc
attgctaaagtgcagcagtatctgccagagcatgatactgatggcttagagatcagcatt
atgtctcctgaagaggcaacgcgtttctctttggctcgtatcaaagaaggtaaagatacg
atttcagttacgggtaacgttttacgtgactacctgactgacttgttccccatcctcgag
ctaggcaccagtgccaaaatgctgtcaattgttccattaatgaacggcggcggtctattt
gaaacaggtgcgggcggtagtgcacctaaacacgtgcaacagcttgagaaagaaggtcac
ttacgttgggattcgctcggtgaattcttggctctggcggcgtctcttgagcatttaagt
caaaccgtaggcaatccaaaagcccaagtattggcagataccttagatcaagccattggc
caattcttagatagcaacaaatcgccatcaagaagagtcggtgagctggataaccgtggc
agtcatttctacttagccatgtactgggcccaagccttagctgcgcaaacgggcgatgag
caactacaagcacactttattcctttggcgcatgcgctggctgcgaatgagcaagtcatt
gtggctgaattagcaaatgcacaaggtgcgtctgtcgatttaggcggttattaccgttta
gatgcggctaaggctgaaaaagccatgcgcccaagcgagacgttaaacaaactgttgatt
gcttaa
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