Shewanella sp. W3-18-1: Sputw3181_1796
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Entry
Sputw3181_1796 CDS
T00453
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03030
DNA replication
shw03430
Mismatch repair
shw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sputw3181_1796
03430 Mismatch repair
Sputw3181_1796
03440 Homologous recombination
Sputw3181_1796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shw03032
]
Sputw3181_1796
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_1796
Enzymes [BR:
shw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sputw3181_1796
DNA replication proteins [BR:
shw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sputw3181_1796
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sputw3181_1796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
WipA_N
Motif
Other DBs
NCBI-ProteinID:
ABM24632
UniProt:
A0A6N3J4A9
LinkDB
All DBs
Position
2066368..2067324
Genome browser
AA seq
318 aa
AA seq
DB search
MVAESGFTAEQLPWLEGPRQAFLAQLQCQKIPHAQLVGIDAAFGGELFSVFMARAALCLA
PNSAGACGFCKSCQLFAAGNHPDFYQIEADGNQIKVDQIRELCVRLTATAQQSGRRVAII
HHSERLNSASANALLKTLEEPGKDTLLILQSDTPARLMATISSRCQRIPFVAPNKAMIKT
WLAQHCHIQEDVTWCLSVVGGPLKLAESLLTDGTQSSRYQSLLQFRKDWAQSLSSGHLCA
SLLTVNEQQIIDALKVLYLLLRQILLKNSHQDAFIQAQVGNLAAKIMGMCHSLSTMPTVN
YLGLCQSYVLEYREITKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtagccgagtccggatttacggctgagcaattgccttggctcgaagggccaaggcaa
gcatttttagcacaattacaatgccagaaaatcccccatgcccaactcgttggtatcgat
gctgcgttcggtggtgagctgtttagtgtgtttatggcgcgtgctgccctgtgtttagcg
cctaattcggcaggcgcatgtggtttttgtaagtcgtgccagttattcgctgcgggcaat
catcccgatttttaccaaatagaagccgatggtaatcaaattaaggtcgatcaaattcgt
gaactttgcgtgcgccttacggcaaccgcgcagcaaagtggtcgccgtgtagcgattatt
catcacagtgagcgccttaattctgcatcggctaatgctctgcttaaaacccttgaagag
ccgggtaaggacacgctgttaatattacagtcggatacaccggcacgtttaatggctacc
atcagtagtcgctgtcagcgcattccttttgtggcgccgaataaggcgatgatcaaaacc
tggttagctcagcattgtcatattcaagaggatgtgacttggtgcctaagtgtggtgggt
ggaccattaaaattggccgagagtttgctaacagatggtacacaatcgagccgctatcaa
tccctgcttcagtttcgcaaagattgggcgcaaagtttgtcgtctggtcatctgtgtgct
agtttattaacagtgaacgaacagcaaataattgatgcacttaaggttttatatctacta
ctgcgacaaattttattgaagaacagtcaccaagatgcgtttattcaggcgcaagtaggg
aacttggcggcaaagatcatgggaatgtgtcatagcttaagcacaatgccgactgtcaat
tatttgggcttatgtcaaagttatgtcttagaatatagagaaataacaaaaaagtaa
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