Shewanella sp. W3-18-1: Sputw3181_1888
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Entry
Sputw3181_1888 CDS
T00453
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00300
Lysine biosynthesis
shw01100
Metabolic pathways
shw01120
Microbial metabolism in diverse environments
shw01230
Biosynthesis of amino acids
Module
shw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sputw3181_1888
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shw01002
]
Sputw3181_1888
Enzymes [BR:
shw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Sputw3181_1888
Peptidases and inhibitors [BR:
shw01002
]
Metallo peptidases
Family M20
Sputw3181_1888
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABM24723
UniProt:
A1RJ78
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All DBs
Position
complement(2170089..2171228)
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AA seq
379 aa
AA seq
DB search
MTAEHFPVTELAKDLISRPSVTPLDEGCQTLMAERLSAIGFNIEPMIFEDTTNMWARRGN
QGPVFCFAGHTDVVPTGDISRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMIVATERFVT
KHPDHQGSIAFLITSDEEGPFINGTTRVIDTLEARKEKITWALVGEPSSTLKLGDVVKNG
RRGSLTGNLTIKGIQGHVAYPHLADNPIHKAAPFLAELSQMHWDNGNEFFPPTSMQIANI
HGGTGASNVIPGALEVMFNFRYSTEVTAEILIERVEALLKAHELDYDISWIFNGLPFLTG
DGPLLDATRYAIHQVTGYDTSPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECVKV
DDLEQLALCYEVILEQLLC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaacattttccggtcaccgaacttgctaaagacctgatttcacgcccttca
gtcactccactcgatgaaggctgtcaaacattaatggcagaaagactgagcgctatcggt
tttaatatcgaacccatgatatttgaagacaccaccaatatgtgggcacgccgtggcaac
caaggcccagttttttgttttgcaggtcacaccgatgtggtacccactggggatataagc
cgctggcatacaccaccatttgaacccaccattatcgatggttatctgtatggccgtggc
gccgcggatatgaaaggttccctcgctgccatgatcgtggcgaccgaacgttttgtgaca
aaacatcctgatcaccaaggctctatcgcctttttaattaccagtgacgaagaaggtcca
tttattaatggcaccactcgggtgattgataccctagaagcgcgcaaagaaaaaatcact
tgggcactggtgggcgaaccttcatcaaccctcaagttaggcgatgtcgtcaaaaatggt
cgtcgtggcagtctcaccggcaatttaaccatcaaagggattcaaggccatgtggcttac
cctcatcttgctgataatcctatccataaagcggcccctttcttagcggagctaagccaa
atgcattgggataacggcaacgaattcttcccccccaccagcatgcaaatcgccaatatt
cacggtggtacaggcgcatcgaacgtgatccccggcgccttagaggtgatgtttaacttc
cgttactcgacagaagtgactgccgagatccttatcgagcgggtagaagccttattaaaa
gcccatgaacttgattatgatataagctggatattcaatggattgccatttttaaccggc
gatggtcctctactcgatgccacgcggtacgctattcaccaagtgacgggttatgacacc
tcaccacaaaccactggtggcacgtccgatggtcgttttattgcacctacgggcgctaaa
gttttagagttaggtccagtaaatgcgaccattcataaagtgaatgaatgtgtaaaagtg
gatgatcttgaacaactcgcgctgtgttatgaagtgattttggaacagctactgtgttaa
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