Shewanella sp. W3-18-1: Sputw3181_1898
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Entry
Sputw3181_1898 CDS
T00453
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03030
DNA replication
shw03430
Mismatch repair
shw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sputw3181_1898
03430 Mismatch repair
Sputw3181_1898
03440 Homologous recombination
Sputw3181_1898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shw03032
]
Sputw3181_1898
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_1898
Enzymes [BR:
shw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sputw3181_1898
DNA replication proteins [BR:
shw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sputw3181_1898
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sputw3181_1898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABM24733
LinkDB
All DBs
Position
complement(2181568..2182206)
Genome browser
AA seq
212 aa
AA seq
DB search
MPKRPTFSPANTLVVLDFETSGLSPNQGARAIEIGAVLIENGVITQRFSELMGPGFRISS
FIEDYTGISNQMLRNAAPCHEVMARFADFIGDNHLVAHNAAFDQRFLDAEFAHIHHEYQG
QFACSLLLARRLYPLASNHQLATLVRYKQLPNNGTFHRALADAEMTGHLWLAMLADLQRD
FAITSPPFSLMQKITQKTKADVAKFIRQYSAK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaccaacgtttagtccagcaaataccctcgtcgtacttgattttgaaaca
tcgggtttatcacccaatcaaggagctagagccatcgaaattggtgcagtattgattgaa
aatggcgtgataacccaacgattttcagagctaatgggtcctggctttaggatcagctct
tttattgaagactacacagggatcagcaaccaaatgctgagaaatgccgccccctgccac
gaagtgatggcacgttttgccgattttattggcgataaccatttagtggcacacaatgca
gccttcgatcaacgctttcttgatgctgaatttgcccatatccaccacgagtatcaaggc
caatttgcctgttctttactactggcaagacgtttataccccttagcgagcaatcatcaa
ctggcgactctagtacgttataaacaattgcctaataacggcacctttcaccgagcttta
gccgatgcagaaatgactggccacttatggttagccatgctggcggatttacagcgtgat
tttgcgatcacatcaccgccttttagcctaatgcaaaaaataactcaaaaaacaaaagcc
gatgtggctaaatttatccgccaatacagcgcgaaataa
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