Shewanella sp. W3-18-1: Sputw3181_1953
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Entry
Sputw3181_1953 CDS
T00453
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K23508
galactofuranose transport system substrate-binding protein
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sputw3181_1953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_1953
Transporters [BR:
shw02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
Sputw3181_1953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
PucR
PTS_IIB
Asparaginase_C
TraJ
Motif
Other DBs
NCBI-ProteinID:
ABM24788
LinkDB
All DBs
Position
2259483..2260421
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AA seq
312 aa
AA seq
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MTKYTLVSVFSLWAIGASCAFAATVGFSQVGSESGWRTSFSEAVKAEAKQRGIDLKFADA
QQKQENQIKAVRSFIAQGVDAIIIAPVVETGWKPVLKEAKRANIPVVIVDRNIKVDDDSL
FLTRIASDFTEEGRKIAQWLMDKTQGNCAIAELQGTVGATAAIDRAAGFNAVIANYPNAN
IVRSQTGEFTRAKGKEVMEGFLKAQNGQALCAIWSHNDEMALGAVQAIKEAGFKPGKDIL
IVSVDGVPDYFKAMADGDVNATVELSPYLGGPAFDAIDAFLKGNKDLPKLISTTGDVFTQ
ETAAVEYEKRRL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatatacattagtttcagtattcagtttatgggcgataggagccagttgcgcc
tttgcggccacggtaggtttttcgcaggtgggctcagaaagtggctggcgaaccagtttt
agtgaggcggtaaaagcggaagccaaacaacggggaatagacttaaagtttgccgatgca
cagcaaaaacaagagaaccaaatcaaggctgtacgtagctttatcgctcaaggcgtcgat
gcgattattatcgcgcctgtcgttgaaacgggttggaagcctgtccttaaggaagccaag
cgagcaaatatccccgttgtgattgttgaccgtaatattaaggtcgatgatgactcactg
tttctcacccgtattgcttctgactttaccgaagaaggccgcaaaatagcgcagtggcta
atggataaaacccaaggtaactgtgcaattgccgagttacagggcacagttggtgcgact
gccgctatcgatcgcgctgcaggttttaatgccgtcattgctaattacccgaatgccaac
attgtgcgtagtcaaactggggaatttacccgcgctaagggtaaagaagtgatggagggt
tttctaaaagcacagaatggtcaagcactgtgcgccatttggtcacataacgatgaaatg
gcattaggtgctgtgcaagccattaaagaagccggatttaagccgggtaaagatatctta
attgtctctgttgatggggtgcctgattacttcaaagcaatggcggatggtgacgttaat
gcaacggtcgaattgagtccatatttaggtggtcctgctttcgatgcgattgatgctttc
cttaagggaaataaagatctgcctaagcttatcagtacaacaggtgatgtattcactcaa
gaaaccgcagcagtcgaatatgaaaaacgtcgcctgtaa
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