Shewanella sp. W3-18-1: Sputw3181_2000
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Entry
Sputw3181_2000 CDS
T00453
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shw03000
]
Sputw3181_2000
03036 Chromosome and associated proteins [BR:
shw03036
]
Sputw3181_2000
Transcription factors [BR:
shw03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Sputw3181_2000
Chromosome and associated proteins [BR:
shw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Sputw3181_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
NirdL-like_HTH
Fe_dep_repress
LexA_DNA_bind
HemN_C
MarR_2
DDRGK
Motif
Other DBs
NCBI-ProteinID:
ABM24834
LinkDB
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Position
2316251..2316757
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AA seq
168 aa
AA seq
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MAYNKKSPVKDLDRIDRNILNELQIDGRISNVELSKRVGLSPTPCLERVKRLEKQGYING
YTALVNPHFLGASLLVFVEITLSRDTPEVFDKFNRAVQLLDDIQECHLVSGDFDYLLKTR
VSDMSAYRRLLGETLLKLPSVSDTRTYVVMEEVKHTSRVAINHLLSDI
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggcatataataaaaagagtcctgtaaaagacttggatcgcatcgatcgcaacattctg
aatgaattacagattgatggccgcatttcaaatgtggagctatcaaaaagagtagggcta
agtcctactccatgtttagaaagagtgaaacgactcgaaaagcagggatatatcaacggt
tatactgcgctggttaatcctcatttcctgggtgcatccctactggtattcgtggaaatc
acattaagccgtgatactcccgaagtgtttgataagtttaatcgtgcagtgcaactactc
gatgatattcaagaatgtcatttagtttctggcgattttgattacttattaaaaacgcga
gtttctgatatgtcggcataccgccgtctacttggggaaacattgctcaaattaccttct
gtttctgatactcgcacttatgttgtaatggaagaagttaagcacaccagtcgcgtagca
ataaatcatctactctcagatatctaa
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