Shewanella sp. W3-18-1: Sputw3181_2005
Help
Entry
Sputw3181_2005 CDS
T00453
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sputw3181_2005
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shw01007
]
Sputw3181_2005
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shw03016
]
Sputw3181_2005
Enzymes [BR:
shw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Sputw3181_2005
Amino acid related enzymes [BR:
shw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Sputw3181_2005
Transfer RNA biogenesis [BR:
shw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sputw3181_2005
Prokaryotic type
Sputw3181_2005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RNase_Y_N
Transcrip_act
Uso1_p115_C
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
ABM24839
UniProt:
A1RJJ4
LinkDB
All DBs
Position
2322206..2323492
Genome browser
AA seq
428 aa
AA seq
DB search
MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQ
AKARGEDVDAIMAQVGDLGSQVDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADETQN
VEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQFM
LDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSM
AALETLTNHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNM
KDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALRSY
MGGLTQIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcctaaatttttacgcaacgaattagctgttaccgcggagcgattggccact
cgaggctttattttagatgtcgctcatcttactcaattagaagaaaaacgtaagtcgttg
caagtggctactgaagaattgcaagcggcgcgtaatgccatctctaaatccatcggacaa
gccaaagcccgcggtgaagatgttgacgcgatcatggcacaagtgggggatttaggctct
caagtcgatgctaaaaaattagagctggcagctgtattggaagaagtgaatgcgattgcg
atgtccatgcctaacctgccagatgaatctgcgccaattggtgccgatgaaacacagaat
gtcgaagtacgccgttggggcacaccacgtagttttgatttcccgatcaaagatcatatt
gacttgggcgaaggcttaaacggtttagattttaaaagcgcggttaagatcaccggctct
cgttttatcgtaatgaaaggccaaatcgcccgattaaatcgcgccttaggtcagtttatg
ttggatctgcatacgactgagcacggttataccgaagcctatgtgccattgctggttaat
gaagcgagtttacttggcacaggccaattgccgaagtttggtgaagacttattccatacc
aaacccgccaccgaagaaggtcaagggttaagtttgatccctacagcagaagtgccactc
actaacttagtgcgtgacagtatagtcgatgaagacgagttaccgattaagctaacagca
cataccgcatgtttccgaagcgaagcaggatcatacggcaaagatacccgtggtcttatt
cgtcagcatcaattcgataaagttgaactcgttcaattagtcaaaccagaagactcaatg
gctgcacttgaaacgctgacaaatcatgccgaaactgtactgcaacgcttaggactacca
tatcgtacagttgtgttatgtacgggtgatatgggttttggctcaagcaagacttatgac
atcgaagtctggttaccaggacaaaatacctaccgtgaaatttcttcttgctcaaacatg
aaggatttccaagcccgccgtatgcaagcgcgttaccgtgttaaagcggataataaaccc
gctttgttacacacattaaatggctctggtttggctgttggccgtaccttagtggcgata
ttagaaaactatcagaatgctgatggcagtgtgactataccagaagcattgcgttcttat
atgggtgggttaactcaaatcggttaa
DBGET
integrated database retrieval system
