Shewanella sp. W3-18-1: Sputw3181_2116
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Entry
Sputw3181_2116 CDS
T00453
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shw01002
]
Sputw3181_2116
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Sputw3181_2116
Peptidases and inhibitors [BR:
shw01002
]
Cysteine peptidases
Family C82
Sputw3181_2116
Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sputw3181_2116
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABM24944
UniProt:
A0A6N3J547
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All DBs
Position
complement(2436085..2437539)
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AA seq
484 aa
AA seq
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MEHAKLPWLSKHGRLFKIVVCSLLFLGMFVSNTLRATSPFDSRINDNSFQQYPFLLEQTL
LFDLAGVNPLFNTNYQALSQAKTEPLQPDDMVRMQGQVTAYWQHISALSGCDAVMTNNTN
ADPMSDIHYQAVLKKISQLIQLESQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMP
KEVDVEQVYTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELRQRI
FSRKLTPRYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRV
PSSILRRDILPHIRKDGYYLQDREFDVYDYSGQLIFHTTEEWQELASSRFPYQLVQRPGP
KNALGKYKFHFDNSFSVYLHGTSEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDK
GLWDRLAPNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLEAEFTNAVTSSI
FNIP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgcaaagttaccttggcttagcaagcacgggcggctatttaagattgtcgtt
tgcagcctgttatttttaggcatgttcgtaagcaatactcttagagcgacatcccccttt
gatagccgtattaatgataattcctttcagcaatatcccttcctcttagaacagactctt
ttattcgatctagcgggtgtaaatcccttatttaacacaaattatcaggcattatcacag
gctaaaacagaaccgcttcaacctgatgatatggttcgcatgcaagggcaggtgacggcc
tattggcagcatatttcagctttatcgggttgtgatgctgtaatgacaaacaatacaaac
gcggatccgatgagtgacatccattatcaggcagtgcttaaaaagatcagccaacttata
caacttgaatcccaattttcttgggaaaccttgatgttagaaaacaaactcaccgtcggt
caaactcatcctatagtcaacactattgccaaacgcctttggttattaggagatatgcca
aaagaagttgatgttgaacaagtctataccgatgagttgatgctaggtattaagcgtttt
caacttcgccatggtttacaaaccgacggggtgattggtaagcaaaccttatattggtta
aatcaatcacctagacaacgggctgtattactcgcaagaaatgaattaagacaaagaata
tttagtcgcaaattaacaccccgttatctgttaattaatgtgccagcttttgagatgaaa
ctggttgaacaggaacaaacggtgttgacctctaaggtgattgtgggtaagtcttcacgg
caaaccccaatactggatagtcaaatatccagtattgtgcttaatcccagttggcgtgtg
cctagcagtattttacgacgggatattttacctcatatccgtaaagacggttattacctg
caagaccgtgaatttgatgtttatgattatagtggacaattaatttttcatacgacggaa
gaatggcaggagcttgcctcttcccgtttcccttaccaattagtgcagcgtccaggccct
aaaaatgcgttaggtaaatataagtttcattttgataatagttttagcgtctatttacat
ggtacttctgaaccagctctatttaaaagggagaatagggcactttcatcgggctgtatt
cgtattgagaaagtcaatgagttagcacagtggttcaaacgtaatcttgttaaagataag
ggcttatgggataggcttgccccaaatgtaacggatccacaatggtttgcactgtcagag
aaattacccgtacatctggtttattggacggcatggcttgatgataaagggcaagatcat
tatcgcaatgatatttatcatttggaggccgagtttacaaatgctgttacaagctcaatt
tttaacattccctaa
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