Shewanella sp. W3-18-1: Sputw3181_2224
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Entry
Sputw3181_2224 CDS
T00453
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00470
D-Amino acid metabolism
shw00550
Peptidoglycan biosynthesis
shw01100
Metabolic pathways
shw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sputw3181_2224
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sputw3181_2224
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sputw3181_2224
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Sputw3181_2224
Enzymes [BR:
shw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sputw3181_2224
Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Precursor biosynthesis
Amino acid ligase
Sputw3181_2224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
Birna_VP2
RimK
Motif
Other DBs
NCBI-ProteinID:
ABM25049
UniProt:
A1RK54
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All DBs
Position
2572278..2573291
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AA seq
337 aa
AA seq
DB search
MSRINLLLLCGGGSAEHDISLMSANYFESSLAKSDQFSVLRVELDKLGQYRTAAGDECEL
TNNREIRFRDETKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLHQYDDEAISQAQTALANWGSIFIKAASQGSSVGCYKVDDS
SKVAQVLKDAFGYAPYVVVEKTIKARELEVAVYEYNGEIVATLPGEIICDTNTFYTFDEK
YAKSSKARTDVVAKDVSVELSEQIRAYAIKAFKGMKLRHLSRIDFFLTAENEILLNEINT
FPGSTPISMFPKMLQNHGHDFTEYLSLVINNQLSAKD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaattaacttacttttgctgtgcggcggcggaagtgctgaacacgatatttca
ctaatgtcggctaactattttgaatcctcattggcaaaatccgatcaattttccgtgtta
cgggtagaacttgataaattgggtcaatatcgcaccgcggcaggcgatgagtgtgaactg
acgaataatcgcgaaatccgttttcgcgatgaaactaaagcgccttggcctgtggactat
gttattccttgcatccatggttatcccggcgaaacaggtgatatccagtcctatttcaac
cttatccaactgccctacttcggctgtgaatccgaagccagtagtaattgttttaataaa
atcaccgccaaaatgtggttttcagccctagggatccccaatactccctacatttttcta
caccaatatgatgatgaggcgatcagccaagcacaaactgccttggctaattggggttca
atctttattaaagccgcgtcgcaaggatcgtctgtcggttgctataaagtggatgacagc
agcaaagtggcacaagtactcaaagatgccttcggctacgcaccctatgttgtcgtggaa
aaaaccattaaagcccgtgaattagaagtcgcggtatacgaatacaatggtgagattgtg
gcaaccctgccaggtgaaattatctgtgataccaataccttctacacctttgatgaaaaa
tacgccaaaagcagtaaggcacgcaccgatgtggttgcaaaagatgtttctgtagaactc
agtgaacagatccgtgcttatgctatcaaggcatttaaggggatgaagctgcgtcacctg
tcacgtatcgactttttcttaaccgctgaaaatgaaattttgctcaacgaaatcaacaca
ttccctggttcgacaccgatttcaatgttccctaaaatgttgcaaaaccacggccacgac
tttaccgaatatttaagcctagtgatcaacaaccagttatcggcaaaggattaa
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