Shewanella sp. W3-18-1: Sputw3181_2456
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Entry
Sputw3181_2456 CDS
T00453
Name
(GenBank) Carbohydrate-binding family V/XII
Organism
shw
Shewanella sp. W3-18-1
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Gene cluster
GFIT
Motif
Pfam:
Phage_Tail_Tip
FNIII-A_GpJ
CBM_5_12
Motif
Other DBs
NCBI-ProteinID:
ABM25280
UniProt:
A0A6N3J570
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Position
complement(2833092..2839295)
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AA seq
2067 aa
AA seq
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MGIPALNQPLLISGEKAGQAKQRTPVESPDDLRSIAKAKVLLAIGEGEFEGQLSGQNVFL
DGTPLLDANGAENFPGVIWDFRPGSVYQTYIPGLPSVENEVALGIELKSDQPYTRAITNS
LLSAVRVRFRWPALQQQLDNGDVNGYRIEYAIDLSTDGGSYQTVLSTAVDGKTTQPYERS
HRIDLPEGNSWQIRIRRLTPNQNNNRVADLMQIAAITDVIDRKLTYPNTALLYVEFDASQ
FQNIPVVSCEPFMRKVRVPTSYNPLTREYTGVWDGSFKIAWTDNPAWVSYDIILDDRFGT
GRRINASLVDKWELYQIAQYCDQLVPNGKGGMEPRYICNIYIQQAAEAWQVLRDLASIYR
GMTYWSNGQMYSVADMPRDVDFIYNNSNVIDGKFSYSSSSEKVKYTRALISWDNPDNAYE
SDVTSVSDQPLQRRYGDNVVELSALGCTRESEAQRRGKWAIYTNNNDRAVNFSVGMDGSI
PLPGYVIGVADQLIAGSRIGGRISAVNGKQITLDRAGTIAVNDRLIINLPSGKAQARTIE
AVNGRVVTVTTEYSETPLPQLLWSVESDELKLQQFRVLRVAKANSDSIEYEITAVEHNPS
KYTYIDTGARLEDRPISKLPVGAQEAPASVTISQSTFTEQTLSVTTMTIQWATAKNAVAY
EVEWRKDSGEWIKLPKTSSTSVDIRGVYTGQYIARVRAINSVDVSSVPKSSALTNITGKT
GLPPAVASFSTTPLVFGIALNWLFPVGAEDTLRTEIEYGPKNNDSGMIKLGDFAYPIATH
TMTGLSAGASFWFRARLVDRTGNVGPWSGFVSGQSSTDQTEYDEYFSERITSSALGQELL
SEIELIPTLKTETDKIPSIDSRLNEVVIPQIELINVEVNKIPDIEISIAAAENKIQQMQS
EIADIAGAPDWDNTASYLTGQLVKYQGKLYSAKQTVPAGTLPTNATYWTKIGEYSSLGEA
VSALTLRVDNVETSIDTIDGKLTAESSRIDGIFAQVNPPLAGDTGWNAGSTVVFAGVWSE
QYARAAADEALSKSIETVAATIDKNTAAIITEQMARATADESLSNQIISISATVNGNAAL
IKQEQTARADADSALASQITTVQASATAANSAASTAQTAADQAKADAATAAGIANGKGKV
IIQSSAPAAADRLAQNLWIDTTGNANTPKRWNGSTWVAVTDKAATDAASAAAAAQAAADA
AQQGVIQNAAAIQTEQTARADADSALASQITTVQASATAANSAASTAQTAADQAKADAAT
AAGIANGKGKVIIQSSAPATADRLAQNLWIDTTGNANTPKRWSGSAWVAVTDKAATDAAS
AAAAAQAAADAAQQGVIQNAAAIQTEQTARADADSALATQITTVQASATAANSAASTAQT
AADQAKADAAAAAGIANGKGKVIIQSSAPATADRLAQNLWIDTTGNANTPKRWNGSAWVA
VTDKAATDAASAAAAAQAAADAANTKATQNAAAIQQEQTARADADSALATQITTVQASAT
AANSAASTAQTAADQAKADAAAAAGIANGKGKVIIQSSAPATADRLAQNLWIDTTGNANT
PKRWNGSAWVAVTDKAATDAASAAAAAQAAADAANTKATQNAAAIQQEQTARADADSALA
TQITTVQASAAFNAAAIQNEATARADADSTQASRIDGIFAQVNPPLAGDISWNAGSAVVF
AGVWSEQYARAAADEALAKNIETVAASINQNTAAIITEQMARSTADESLANQIISISATV
NSNAALIKQEQTARADADSALAQNISTVQASATSANTAASTAQTAADQAKADAAAAAGIA
NGKGKVIIQSSAPATADRLAQNLWIDTTGNANTPKRWNGSAWVAVTDKAATDAASAAAAA
QAAADAANTKATQNAAAIQTEQTARANADSALATQITTVQATANNASAAVQQTSTALADL
DGKLQAMYSIKVGVTADGKYYGAGMAIGVENTPSGMQSQVLFTADRFAIVNQITGASTIT
TPFAVQGGQVFINSAVIGDGTITNAKIGSFIQSTNYVAQTTGWKLDKAGVFEINGSTAGQ
GRMQISNNRIDVYDNSGNLVCRMGKLT
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacctgcattaaatcaaccattactgatcagcggtgaaaaagctggacaagca
aaacaacgcacacctgtagaatcgcctgatgatctgcgctcaattgccaaagctaaagtg
ttgctggcaattggcgaaggggagtttgagggccaattatccggccaaaatgtgttttta
gatggcacgccattactcgatgcaaatggtgctgaaaacttccccggtgtgatttgggat
tttcgtccgggttctgtgtatcaaacgtatattcctggcttgccctctgttgaaaacgag
gtggcattaggtattgagttaaagtctgatcagccttacacgcgcgccattacaaactca
ctgctctctgcggttcgtgtgcgatttcgctggccagcgctacaacaacagcttgataac
ggtgatgtaaatggctatcgcattgaatacgccattgatctctctactgacggcggtagc
tatcagactgtgttaagcactgcagttgacggcaaaaccacccagccctatgagcgcagc
caccgcattgatttacctgagggtaacagctggcaaatccgtattcgccgactcacgcca
aaccaaaacaacaaccgtgtggccgacttaatgcaaattgcagcgatcaccgatgtgatt
gaccgcaagctaacgtaccccaataccgcattgctttatgtcgagtttgacgccagccaa
tttcaaaatatccccgtggtttcgtgcgaaccctttatgcgcaaagtgcgggtgccgaca
agctataatccgcttacccgcgaatatacgggcgtttgggatggcagctttaaaatcgca
tggaccgataacccagcatgggtgagttacgacattatcctcgacgatcgctttggcact
ggacgcaggatcaatgcgtcgctggtggataaatgggagctttaccaaattgcgcaatat
tgcgatcaactggtgccaaacggtaagggaggcatggagcctcgctatatctgcaatatt
tatattcagcaagcagctgaagcatggcaagtactgcgggatttggcgtctatctatcgt
ggcatgacctattggtcaaacggccaaatgtactcagttgcagatatgccgcgcgatgtc
gattttatctacaacaacagcaatgtgatcgacggcaagtttagctattcatccagcagc
gaaaaagttaaatacactcgagcattaatcagctgggataaccctgataatgcttatgaa
tccgatgttacctctgtatcagatcaaccattacagcgccgctatggtgacaatgtagtc
gaattatccgccttaggttgcacccgcgaatcagaagcgcagcgccgcgggaagtgggca
atctataccaataacaatgaccgcgcggttaattttagcgtggggatggatggcagcatc
ccattacctggttatgtgattggcgtagccgatcaactgattgcaggtagccgcattgga
gggcggatctcagcggttaatggcaagcagatcaccttggaccgtgcgggcaccatcgcg
gttaatgatcgcctcatcatcaacttgcccagcggcaaagcgcaggctcgcaccattgag
gccgttaatggccgagtggtaacggtaaccacagaatacagcgaaacgccattgccacag
cttttatggtcggttgaatcagacgagctaaagctgcagcaatttagagtgctgcgtgtc
gccaaagccaacagcgacagcattgagtacgagatcacagcggttgaacataaccccagc
aaatacacatacattgatacaggcgcacggttagaagatcggccaattagtaaattgcca
gtgggggcgcaagaagcacctgctagcgtgaccatcagccagtcaacattcactgagcaa
accctgtcagtcacaacgatgacgattcagtgggccacggctaaaaatgcagtcgcttac
gaagtggaatggcgcaaagactctggcgagtggataaaactgccaaaaaccagcagtaca
tcagtcgatatccgtggcgtttacaccgggcaatatattgctagagttcgtgcaattaac
tcagttgatgtttcgtcggtaccaaagtcatcagcgctgaccaatatcacaggtaaaact
ggcttgcctcctgcagtagcatctttttccaccacgccgttagtgtttggcattgcgtta
aattggttattccctgttggtgcagaggacacgctccgtacagagattgaatacgggccc
aaaaataacgacagtggcatgatcaagttaggagattttgcctacccaattgccactcac
accatgacaggattaagtgccggcgctagcttttggtttagagctcgattggttgatcgc
actggcaacgtggggccatggtcaggatttgttagcggacagtcatcgacagatcaaact
gaatatgatgagtatttcagcgagcgcattacatcatccgcactcgggcaagagttgctc
agtgaaatagagttgatcccgacgcttaaaactgaaaccgataaaatcccgagcattgat
agtcggcttaatgaggttgtaatccctcagattgagctgatcaatgtcgaagttaataaa
atccctgatattgagatcagcattgctgccgccgaaaacaaaattcagcaaatgcagtcc
gagatcgccgatattgcaggcgcaccagattgggataacaccgccagctatctcactggg
cagttggttaaatatcaaggcaagctttactcagctaaacaaaccgtacccgcaggaaca
ctgccaaccaacgccacctattggacaaaaattggtgaatattcctctttgggtgaagct
gtttcagcacttactttgcgtgtagataatgttgagacctcgattgacactatcgatgga
aagctaacagcagaatcatctcgtattgatggtatttttgctcaggttaatccgccatta
gctggcgatactggctggaatgccggatcaaccgtggtttttgctggcgtgtggtctgag
caatatgcaagagccgctgccgatgaggccttatcaaaaagcattgaaacggttgccgcg
accattgataaaaatactgctgcgatcatcacagagcaaatggcgagagccactgcagat
gaatcgctatcaaaccaaatcatcagtatttcagcaacggtcaatggcaatgcggcatta
attaaacaagagcaaaccgcacgcgctgatgccgatagcgctttagcatcgcaaatcacc
actgtgcaggcctcagccaccgcggcaaactctgccgcctcaacggcgcaaactgcagca
gaccaagccaaagccgatgctgccaccgcggctggtatcgccaatggtaagggtaaagtg
attattcaatcttccgcgcctgcagctgctgatcgcttagcgcaaaacttgtggattgat
acgactggcaatgccaacacgcctaagcgttggaacggttcaacttgggtagctgtgact
gacaaagctgcgaccgatgccgcgagtgcagcagctgctgcccaagccgcggcggacgcc
gcccagcaaggggtgattcaaaacgctgcagcaattcagactgaacagaccgcacgcgct
gatgccgatagtgctttagcatcgcaaatcaccactgtgcaggcctcagccaccgcggca
aactctgccgcctcaacggcgcaaactgcagcagaccaagccaaagccgatgctgccacc
gcggctggtatcgccaatggtaagggtaaagtgattattcaatcttccgcgcctgccact
gcagatcgtttagcgcaaaacctatggattgatacgactggcaatgccaacacacctaaa
cgttggagtggctcagcatgggtagctgtgactgacaaggctgcgaccgatgccgcgagt
gcagcagctgctgcccaagccgcggcggacgccgcccagcaaggggtgattcaaaacgct
gcagcaattcagactgaacaaaccgcccgtgcggatgccgacagcgccttagcaacacaa
atcaccacggtgcaggcctctgctacagcggccaactctgcggcctcaacggcgcaaact
gccgcagatcaagctaaagctgatgcggccgctgccgctgggatcgccaatggcaaaggc
aaagtgatcattcaatcgtcagcaccagcgacagcagaccgtttagcgcaaaacctatgg
attgataccactggcaatgccaatacaccaaaacgttggaacggctcagcatgggtagca
gtgactgataaagcggccacggatgccgccagcgccgcagcagccgcacaagccgccgcc
gatgcggccaacaccaaggccacgcaaaacgccgcagccatccagcaagaacaaaccgcc
cgtgcagatgccgacagcgccttagcaacacaaatcaccacggtgcaggcctctgctaca
gcggccaactctgcggcctcaacggcgcaaactgccgcagatcaagctaaagctgatgcg
gccgctgccgctgggatcgccaatggcaaaggcaaagtgatcattcaatcgtcagcacca
gcgacagcagaccgtttagcgcaaaacctatggattgataccactggcaatgccaataca
ccaaaacgttggaacggctcagcatgggtagcagtgactgataaagcggccacggatgcc
gccagcgccgcagcagccgcacaagccgccgccgatgcggccaacaccaaggccacgcaa
aacgccgcagccatccagcaagaacaaaccgcccgtgcggatgccgacagcgccttagca
acacaaatcaccacggtgcaggcctctgcggcatttaatgctgccgcaatacagaacgaa
gcaacagcaagagctgatgctgacagcacccaagcatcacgcatagacggtatatttgcg
caagtaaacccgcctcttgctggtgatattagctggaatgccggttctgctgtggtgttt
gctggcgtttggtctgagcaatatgcaagagctgcagcagatgaggcattggcaaaaaac
attgaaactgtggccgctagcattaatcaaaacactgctgcaatcatcactgaacaaatg
gcgagatccactgcagatgaatcgctcgcaaaccaaatcatcagtatttctgccacggta
aacagcaatgcggcgttaattaagcaagagcaaaccgcccgtgcggatgctgatagtgcg
ttagctcaaaatattagtacggtgcaggcctcggcaacatcggcgaacactgcggcctca
actgcacaaactgccgcagatcaagctaaagctgatgcggccgctgccgctgggatcgcc
aatggcaaaggcaaagtgatcattcaatcgtcagcaccagcgacagcagaccgtttagcg
caaaacctatggattgataccactggcaatgccaatacaccaaaacgttggaacggctca
gcatgggttgcagtaaccgataaagcggccacggatgctgccagcgctgcagcagcggca
caagctgccgccgatgctgccaataccaaggccacacaaaacgctgcggcaattcagact
gagcaaacagctcgagctaatgcagatagtgccttagcaacacaaatcacgacggtgcag
gctacagctaacaatgcatcagccgcagtgcagcaaacatcaaccgcgttagctgattta
gatggcaagctgcaagcaatgtactcgattaaagtgggggtgactgctgacggtaaatac
tatggcgcaggtatggcaatcggtgtggagaacacaccatctggcatgcaatcgcaagtg
ctatttactgccgatagatttgccattgttaatcaaatcactggcgcatctaccatcaca
accccttttgcggtacagggcggtcaggtatttattaatagcgctgtaattggggatggt
acaattaccaatgccaagatcggcagttttatccagtcaacaaactatgttgcacaaaca
acaggctggaaactggataaagcgggtgtatttgagatcaatggctctactgctggccaa
gggcggatgcaaatatcaaataatcgaatcgatgtttatgacaacagcggcaatttagtt
tgcaggatgggtaaattaacatga
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